Hymenobacter sp. DG25B: PK28_16320
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Entry
PK28_16320 CDS
T03500
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PK28_16320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyd03400
]
PK28_16320
DNA repair and recombination proteins [BR:
hyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PK28_16320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
AAA_14
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIZ65317
UniProt:
A0A0A7LUF1
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Position
complement(3799184..3801868)
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AA seq
894 aa
AA seq
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MKQYYQLKQQHPGALLLFRVGDFYETFGEDAVTAARILEITLTKRGAGTSSETPLAGFPH
HSLDNYLPRLVRAGQRVAICDQLEDPKQAKGLVKRGITELVTPGVSFNDNVLERKSNNYL
CAVHFGKQECGISFLDISTGEFLVAQGDHNYIGKLLQNFSPAEVLFCKKSRHDFEHHYGP
DFCHYALDEWVFGFDYTHDILTRHFNTTSLKGFGIDGLREGITAAGCILHYLAETKHDDV
AHISSIGRLEEDKYVWLDRFTVRNLELVYPQHPGGVPLIDILDQTVTPMGARLLRKWVVL
PLKEPVQIQRRLDTVDGLLQNSELLGELNQQLRQINDLERLISKVAVRRINPRELLQLAR
ALEAMEPIRALLAGSGLKALQKLADQLNPCASLREEINTKIRPDAAVLTNQGNVILDGVH
QELDELRSIAFSGKDYLLQLQQREQRNTGISSLKVAYNKVFGYYLEVTNAHKDKVPTTWI
RKQTLVNAERYITEELKTYEEKILHAEDRLFVIEQQLYNELVLTAGEFVPQIQQNARAIG
VLDCLASFATTARQHRYVKPEVNESTVLDIRQGRHPVIERQLPPGEAYIPNDICLDQEDQ
QIVVITGPNMAGKSALLRQTALIVLLAQIGSFVPAEAATIGVIDKIFTRVGASDNLSKGE
STFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNNPKARAKTLF
ATHYHELNQLADDCPRVRNYNVAVKEADGRILFLRKLQEGGSEHSFGIHVARMAGMPTAV
VLRANEIMHHLEQERTSAGLEEGPTEFDDVLAGLDDRPASNGKAKAKAARGPVAQPAAAV
ATAPRPSLQLSMFEPADPALERVRELLQHLDVNTLTPIEALLKINELKLVLGGK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtactatcagctgaagcagcagcaccccggcgcgctgctgctgttccgcgtc
ggcgacttctatgagaccttcggggaagatgccgtaacggcggcgcgcattctggaaatc
accctcactaagcgcggcgcgggcacctcctccgaaaccccgctggcgggtttcccccat
cactccctcgataactacctgccccgcctggtgcgcgccgggcagcgcgtagccatttgc
gaccagctggaagaccccaagcaggccaaaggcctggtgaagcgcggtattacggagctc
gtcacgccgggcgtctcgttcaacgacaacgtgctggagcgcaagagcaacaactacctc
tgcgccgtgcattttggcaagcaggagtgcggcatcagctttctggatatcagcaccggc
gagtttctggtagcccagggcgaccataactacatcggcaagctgctgcagaatttcagc
cccgccgaggtgctcttctgcaagaaaagccgccacgatttcgagcaccactacggcccc
gatttctgccactatgcgctggatgagtgggtgtttggcttcgattacacccacgatatt
ctcacccgccacttcaacaccacgtccctcaaaggctttggtattgatggcctgcgcgag
ggcatcacggccgccggctgcatcctgcactacctcgccgaaaccaagcacgacgatgtg
gcgcacatcagcagcattgggcggctggaagaggataagtacgtgtggctggaccgcttc
accgtccgcaacctggagctggtctacccccagcaccccggcggcgtgcccctcattgat
attctggatcagaccgtgacgcccatgggcgcgcgcctgctgcgcaagtgggtggtgctg
cccctgaaagagcccgtgcagattcagcgccgcctcgataccgtggatggtctgctgcag
aacagtgagctgctgggcgagctgaatcagcagctgcgccagataaacgacctggagcgc
ctgatttccaaggtagctgtgcgccgcatcaacccgcgcgagctgctgcagctcgcccgc
gccctggaagccatggagcccatccgggccctgctggctggttccggcctgaaagccctg
caaaagctggctgatcagctgaacccctgcgcctcgttgcgggaggaaatcaacaccaaa
atccgccccgatgccgcggtactgaccaaccagggcaacgtgattctggatggcgtgcac
caggagctggacgaactgcgcagcattgcgttttcgggcaaggactacctgctgcaattg
cagcagcgcgagcagcgcaacaccggcatcagctccctgaaagtggcctataacaaggtg
ttcggctactatctggaagttaccaacgcccacaaggacaaggtgcccaccacctggatt
cggaagcagaccttggttaacgccgagcgctacatcacggaagagctcaaaacctacgag
gagaaaatcctgcacgccgaggaccgcctgtttgtgattgagcagcagctctacaatgag
ctggtactcacggccggagagtttgtgcctcagattcagcagaacgcacgcgccattggc
gtgctcgattgcctggcttcctttgctaccaccgcccgccagcaccgctacgtgaaaccg
gaagtgaatgagtccaccgtgctggatatccgccaggggcgccacccggttattgaacgc
cagctgccccccggcgaggcttacattcccaacgacatctgcctggatcaggaagaccag
cagattgtggtgattaccggccccaacatggccggtaaatcggccctgctgcgccagaca
gccctgattgtgctgctggcccagattggctctttcgtgcccgccgaggccgctaccatc
ggcgttatcgacaaaatcttcacccgtgtgggcgcttccgataacctgagtaagggcgaa
agcaccttcatggtggagatgacggaaaccgccagcatcctcaataacctctccgacaga
agcctggtgctgatggatgaaatcgggcgcggcaccagtacctatgacggtatcagcatt
gcctgggccattgtggagcatctgcacaacaaccccaaagcgcgggccaaaaccctgttc
gccacccactaccacgaactcaaccagctggccgacgactgcccgcgggtgcgcaactac
aacgtggccgtgaaggaggccgatgggcgcattctgttcctgcgcaagctgcaggagggc
ggctcggagcacagttttggcatccacgtggcccgcatggccggcatgcctacggccgtg
gtgctgcgcgccaacgaaattatgcaccacctggagcaggagcgcaccagcgccggcctg
gaagagggccccacggagtttgatgacgtgctggccgggctggatgatcggccagccagc
aatggcaaagccaaggcaaaggctgcccgtggtccggtagcccagcccgccgcagccgtt
gctaccgccccgcgccccagtttgcagctcagcatgtttgagcccgctgacccggccctg
gagcgcgtgcgggagctattgcagcacctggacgtgaacaccctgacacccattgaagcc
ttgttgaaaatcaatgagttgaagctggttttaggcggtaagtag
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