Hydrogenophaga sp. ANAO-22: ABSY19_01730
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Entry
ABSY19_01730 CDS
T10785
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyda03009
]
ABSY19_01730 (rimO)
Enzymes [BR:
hyda01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABSY19_01730 (rimO)
Ribosome biogenesis [BR:
hyda03009
]
Prokaryotic type
ribosomal protein modification factors
ABSY19_01730 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
XHM84521
LinkDB
All DBs
Position
complement(419920..421302)
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AA seq
460 aa
AA seq
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MTYDTASAAKTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADLVIVNTCGFI
DDAVRESLDTIGEALAENGKVIVTGCLGAREGEGGGNLVRQMHPSVLAVTGPHATHEVMT
AVHEHLPKPHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIG
DVLTEARKLFESGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVKTRMFDLVRSLGELAQG
YGAWVRLHYVYPYPHVDEIIPLMADGLCLPYLDVPLQHSHPDVLRRMKRPASGEKNLERI
ARWRELCPQIVVRSTFIAGFPGETEAEFDHLLEFVREARIDRAGCFAYSPVPGATANELP
DAVPDAVREERRARFMAVAEAVSAEKLQQRVGATMQVLVDSAPGLGKKGGIGRSYADAPE
IDGVVRLLPPEKISKTMKVGEFTKARVVAAQGHDLLAVPV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacttacgacaccgcctccgccgccaaaacacccaaagtcgggttcgtcagcctgggt
tgccccaaggcgctgaccgactccgaactgatcctcacgcaactcagcgccgagggttac
caaacctccaagacctttgccggtgccgatctggtgatcgtcaacacctgcggcttcatc
gacgacgccgttcgcgagagtctggacaccattggcgaagccctggccgagaacggcaag
gtgattgttaccgggtgcctgggcgcgcgcgaaggcgagggtggtggcaacctggtgcgg
cagatgcatcccagcgtgctcgccgtgaccggcccgcatgccacgcacgaggtgatgacg
gcggtgcacgagcacctgcccaagccgcacgaccccttcgtggacctggtgccgccgcag
ggcatcaagctcacgccgcgccattacgcctacctgaagatcagtgagggctgcaaccac
cgctgcacgttctgcatcatcccgtccatgcgcggcgacctggtgagccgaccgatcggc
gacgtgctgaccgaagcgcgcaagctgttcgagtctggcgtgaaggagctgttggtggtg
agccaggacacctcggcctacggcgtcgatgtgaagtaccgcaccggcttctgggatggc
aagccggtgaagacgcgcatgttcgatctcgtgcgctcgctgggtgaactggcccagggc
tatggcgcctgggtgcggctgcactatgtgtacccgtatccgcacgtggacgagatcatt
ccgctgatggccgacggcctgtgcctgccttacctggacgtgccgttgcagcacagccat
ccggacgtgctgcgccgcatgaagcggcccgccagtggtgagaagaacctggagcgcatc
gcgcgctggcgcgagctctgcccgcagatcgtggtgcgcagcaccttcattgccggcttc
cctggcgagaccgaggccgagttcgaccacttgctggaattcgtgcgcgaggcgcgcatc
gaccgcgccggctgcttcgcctattcgccggtgccgggtgccacggccaacgagctgccg
gacgccgtgcccgatgccgtgcgggaagaacgccgggcgcgcttcatggcggtggccgag
gccgtgtcggccgagaagctgcagcagcgcgtgggcgcgaccatgcaggtgctggtggat
tccgcgccgggcctgggcaagaagggcggcattggacgcagttacgccgatgcgccggag
atcgatggtgtggtgcggctgctgccgccagagaagatcagcaagaccatgaaggtcggc
gaattcaccaaggcccgtgtggtcgcggcacagggacacgacctgttggcggtcccggtt
tga
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