KEGG   Hydrogenophaga sp. ANAO-22: ABSY19_02335
Entry
ABSY19_02335      CDS       T10785                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hyda  Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:hyda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyda03400]
    ABSY19_02335
Enzymes [BR:hyda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ABSY19_02335
    5.6.2.6  RNA 3'-5' helicase
     ABSY19_02335
DNA repair and recombination proteins [BR:hyda03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ABSY19_02335
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII AAA_25
Other DBs
NCBI-ProteinID: XHM82125
LinkDB
Position
533300..535768
AA seq 822 aa
MTLSPRPPAARTRAAGAALFAWFAAQGWSPAPFQRQVWRHWQRGESGLLVTPTGSGKTLA
ALGGALLDGLREAAPASPTSRLRLLWVTPLRALATDTTQALSAPLEALGLPWTVAKRTGD
ASSRDRRLARQGLAEVLVITPESLALMLSYPETAALLAGLRGVIVDEWHELLGNKRGVLL
QLTLARIRALAPTAVTWGLSATLGNLDEARDVLLPHRPGAPVVRGARRRGLVLQTLLPEH
GERFAWAGHLGLSQLERVMQLIAGARSAILFTNTRAQAELWHRALSSIWLEAPGTLALHH
GSLDTALRLAAEQGLRDGSVRCVVATSSLDLGVDFPAVELVMQVGSPKGLARLLQRAGRA
NHRPGEAGVVHGVPTHALELAEFAAARKAIAAGEIEARRPPRLSLDVLSQHCVTLALGGG
FEPDALLAEVRGTHAFAALSDTQWAGVLRFIERGGQALENYPDFHRAVRGDDGVYRVTDR
RVALRHRLSIGTITADGAVAVRFPRGASLGSVEESFISRLRPRDRFQFAGRTLELVAVDQ
MTAYVRKAKGLSAAVPRWQGGRMPLSTELGAAMEAVLDGPRDSPELRALAPLLDLQARVS
ALPTPRTLLVETVRTRGRASLFVYPFAGRTVHEGMAALFALRWGRLAPNTFLYAVNDYGF
VLNASQPAPADADLIARLLAPADLLDDLREGLNLTEMARRQFREIARVAGMLVPSLPGGA
QRSARQLQASSGLLFDVLQRYDPHHLLLAQAVREVFEAQMDVQALTAAFTRCAARTIDLR
QPRTLTPLSFPLWAETVRGELSTEDWSARVRRAAEQLQARHG
NT seq 2469 nt   +upstreamnt  +downstreamnt
gtgaccctgagcccgcgcccaccggctgcccgcacccgcgcggccggcgcggcgctgttc
gcgtggttcgccgcccagggttggtcccccgcccctttccagcggcaggtgtggcgccat
tggcagcgcggagagtcgggcctgctcgtcacccccaccggcagcggcaagaccttggcg
gcgctgggcggcgccttgctcgacggcctgcgcgaggcggctcccgcgtcccccacctcg
cgcctgcgcctgctctgggtgacgccgctgcgcgccctggccaccgacaccacccaggcc
ctgagcgcgccgctggaagccctgggcctgccctggacggtggccaagcgcacgggcgac
gccagctcgcgcgaccggcgcctggcccgccagggcttggccgaggtgctggtgatcacg
cccgagtcgctggccctgatgctgtcctatcccgagacggcggccctgctcgcggggctg
cggggcgtgatcgtggacgagtggcacgagctgctgggcaacaagcgcggcgtgctgctg
caactcacgctggcgcgcatccgcgcgctggcgcccacggccgtgacctggggcctctcg
gccacgctgggcaacctggacgaggcgcgcgacgtgctgctgccgcaccggcccggcgcg
ccggtggtgcgcggcgcgcggcgccggggcctggtgctccagacgctgctgcccgagcac
ggcgagcgcttcgcctgggccggccacctgggcctgtcgcagctggagcgggtgatgcag
ctgattgccggcgcgcgcagcgcgatcctgttcaccaacacgcgcgcgcaggccgagctg
tggcaccgtgcgttgtcgtcgatctggctggaagcgccgggcaccctggccctgcaccac
ggctcgctggacacggcactgcgcctggccgccgagcagggcttgcgcgacggcagcgtg
cgctgcgtggtggccacctccagcctggacctgggtgtggactttcccgccgtggagctg
gtgatgcaggtgggcagccccaagggcctggcacgcctgctgcagcgcgccggccgcgcc
aaccaccggcccggcgaggccggcgtggtccacggcgtgcccacgcacgcgctggaactg
gccgagttcgccgccgcgcgcaaggccatcgcggccggggagatcgaggcccggcgcccg
ccacgcctgtcgctggacgtgctgtcacagcactgcgtgacgctggcgctgggcggcggc
ttcgagccggacgcgctgctcgccgaggtgcgcggcacacacgccttcgccgccttgagc
gacacgcaatgggcgggcgtgctgcgcttcatcgaacgcggcggccaggcgctggagaac
taccccgacttccaccgcgcggtgcgcggcgacgacggcgtgtaccgcgtgacggaccgg
cgcgtggcgctgcgccaccggctctccatcggcaccatcacggccgacggcgcggtggcg
gtgcgctttccgcgcggcgcctcgctgggttcggtggaggagagcttcatcagccggctg
cgcccgcgcgaccgtttccagttcgccggccgcacgctggagctggtggcggtggaccag
atgacggcctatgtgcgcaaggccaagggcctgagcgccgccgtgcctcgctggcagggt
gggcgcatgccgctgtccaccgaactgggcgcggccatggaggcggtgctcgacggcccg
cgcgacagcccggaactgcgcgccctggcccccttgctggacctgcaggcgcgcgtctcg
gccctgcccacgccgcggaccctgttggtggagacggtgcgcacgcgcgggcgcgcgtcg
ctgttcgtctaccccttcgccggccgcacggtgcacgaaggcatggccgcgctgttcgcc
ctgcgctgggggcgcctggcgcccaacaccttcctgtacgcggtcaacgactacggcttc
gtgctgaatgcctcgcagcccgcgccggcggacgcggacctcatcgcgcggctgctcgcg
ccggcggacctcctggacgacctgcgggagggcctgaacctgaccgagatggcgcgccgc
cagttccgagagatcgcgcgcgtggccggcatgctggtgccttcgctgcccggcggcgcg
cagcgcagcgcgcggcaactgcaggcttccagcggcctgctgttcgacgtgctccagcgc
tacgacccgcatcacctgctgctggcccaggcggtgcgcgaggtgttcgaagcgcagatg
gacgtgcaggccctcacggccgcgttcacgcgctgcgcggcgcgcaccatcgacctgcgc
cagccccgcacgctgaccccgctgtcgtttccgctgtgggcggagacggtgcgcggcgag
ctgagcacggaagactggtcggcccgggtgcggcgcgcggccgagcaactgcaggcgcgc
catggctga

DBGET integrated database retrieval system