Hydrogenophaga sp. ANAO-22: ABSY19_03755
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Entry
ABSY19_03755 CDS
T10785
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyda03000
]
ABSY19_03755
Transcription factors [BR:
hyda03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABSY19_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
PAS_4
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_30
HTH_23
HTH_7
P22_Cro
HTH_22
HTH_29
HTH_11
AAA_16
HTH_Tnp_ISL3
HTH_17
NUMOD1
Xre-like-HTH
NB-ARC
AAA_3
sCache_3_3
MCM
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XHM82395
LinkDB
All DBs
Position
814567..816624
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AA seq
685 aa
AA seq
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MSAALFTPPGGRHDAPAPPGPDGNAPPDPIGQAHRRSQAYGIDSTDAPDFSSPGVGLLND
AREENRFLFQHAAPVMETLYDQIVNTHSMVLLTSAKGLVLHSLGDTDFLEKASQVALTPG
MDWSEKNKGTNAIGTALSEEEALTVHGSQHYMDANKFLTCSCSPIFDPYGQVIGALDVTG
DHRSYHQHTLALVRMSAQMIENHMFADIFPKAIRIHFHTRSEFLGTLVEGIAVFSPEGRF
LSANRSAQFQIGLPFSALKAHTFSSLFGLPISALFELFSGSMPTPKQLCMHNGVSVWCRV
KIKAANPWSGGKPTGTAPEAGGTPAAATAEAVKPAGRKMQFSSLQYLDTGDPQVSTVIHK
LRRVSGRDIPVMILGETGTGKDLLAQAIHGDSTRSAHPFVSVNCASIPDTLIESELFGYE
EGAFTGARKKGSIGKILQAHGGTLFLDEIGDMPKHLQARLLRVLQDRKVSPLGAGKEVEV
DVTVISATHKNLKDMIARGDFREDLYYRLNGLVVRLPALRERTDFELVVHKILKALCEQD
QQIGIAPNVMALFKRYQWPGNFRQLHNLLRTAVVMVGSDGVIDVAHLPDDFLDELEHAQA
GDATEAALPEAFGTAAAGSAPLPPPSPLTEVAPGDGQRLQDVTLSAMAQMLRLHKGNVSA
AAKALGVSRNTIYRKKDQLPPDLLG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgccctcttcacgcctcccggcggaagacacgatgcgcccgcgccccccggc
ccggacggcaacgcaccacccgaccccatcggccaggctcaccgccggtcgcaggcctat
ggcatcgactccacggacgcgcccgatttctccagccccggcgtgggtctgctcaacgat
gcgcgggaagagaaccgattcctgttccagcacgccgccccggtcatggagacgctgtac
gaccagatcgtgaacacccacagcatggtgctgctcacctccgccaagggcctggtgctg
cactcgctgggtgacaccgacttcctggaaaaagcctcgcaggtcgcgctcacgcccggc
atggactggtccgaaaagaacaagggcacgaacgcgatcggcaccgcgctcagcgaggaa
gaagcgctcaccgtgcacggcagccagcactacatggacgccaacaagttcctcacctgc
tcctgctcgccgatcttcgacccctacgggcaggtcatcggcgcgctggatgtgacaggc
gaccaccgcagctaccaccagcacacgctggcgctggtgcgcatgtcggcgcagatgatc
gagaaccacatgttcgcggacatcttccccaaggcgatccgcatccacttccacacccgc
tccgagttcctgggcacgctggtggaaggcatcgcggtgttttcgcccgaggggcgtttc
ctctcggccaaccgcagcgcgcagttccagatcgggctgccgttcagcgcactgaaagcg
cacaccttctcctcgctcttcggtctgccgatctcggccctgttcgagctgttcagcggc
tccatgcccacgcccaagcagctgtgcatgcacaacggcgtgtcggtgtggtgccgcgtg
aagatcaaggccgccaacccctggtcgggcggcaaaccgaccggcaccgcgcccgaggcc
ggtggcacgccagcagcggccacagccgaagcggtcaagcctgccggccgcaagatgcag
ttttcctcgttgcagtacctcgacacgggcgacccgcaggtgtcgacggtcatccacaag
ctgcgccgggtctcggggcgcgacatcccggtgatgatcctcggcgaaaccggcaccggc
aaggacctgctggcccaggcgatccatggcgattccacgcgctcggcccaccccttcgtg
tcggtgaactgcgcctcgatccccgacacgctgatcgagtccgagctgttcggctacgaa
gaaggcgccttcaccggtgcgcgcaagaagggctccatcggcaagatcctccaggcccac
ggcggcacgctgttcctcgacgagatcggtgacatgcccaagcacctgcaggcccgcctg
ctgcgcgtgctgcaggaccgcaaggtcagcccgctgggcgcgggcaaggaggtggaggtg
gacgtgacggtgatcagcgccacgcacaagaacctcaaggacatgatcgcgcgcggcgat
ttccgcgaagacctctactaccgcctcaacggcctggtggtgcgcctgccggcgctgcgc
gagcgcaccgacttcgagctggtggtccacaagatcctcaaggcgctgtgcgagcaggac
cagcagatcggcatcgcgcccaacgtcatggcgctgttcaagcgctaccagtggccgggc
aacttccgccagttgcacaacctgctgcgcaccgccgtcgtgatggtgggcagcgacggg
gtgatcgacgtggcgcacctgcccgacgacttcctcgacgagctggaacacgcccaggcc
ggtgatgcgaccgaagccgccctgcccgaggccttcggcacggccgccgccggcagtgcg
ccgctgccgccgccctcgccgctgaccgaggtggcgccgggcgacggccagcgcctgcag
gacgtgaccctcagcgccatggcgcagatgctgcgcctgcacaagggcaatgtgtcggcg
gcagccaaggccctgggcgtgtcgcgcaacaccatctaccgcaagaaggaccagctaccg
cccgacctgctcggctga
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