Hydrogenophaga sp. ANAO-22: ABSY19_04980
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Entry
ABSY19_04980 CDS
T10785
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyda03032
]
ABSY19_04980
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_04980
Enzymes [BR:
hyda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABSY19_04980
DNA replication proteins [BR:
hyda03032
]
Prokaryotic type
DNA Topoisomerases
ABSY19_04980
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABSY19_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XHM82622
LinkDB
All DBs
Position
1069943..1071034
Genome browser
AA seq
363 aa
AA seq
DB search
MPAPLTYAQDDTPGWTRVRRGKGFAYVSATGRAIRDAAQLDRIKRLAIPPAYTEVWICPS
ARGHLQATGRDARGRKQYRYHAEWQARREQQKFDRMREFGRTLPRIRRAVTRDLRSRELT
QDTVVAAIVRLLDRTALRVGNEAYATENGSFGLTTLRDRHVRTRAASLEIRFRGKSGVEQ
TARLTDPATARIVQRCQELPGQHLFQYIDDAGRRRPVRSQHVNQYLRRVSGHGFTAKDFR
TWHASVLALELTAGVTPSVPGDAVAPTRATVVEVVRQVARQIGNTQAVCRRFYIHPAVLQ
AVLDGPARKEEKAGGTTESALLRLLSRRKRKKAQPSSPSASRARQISAPIAAPTRGASQN
SQS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccactcacctatgcgcaggacgacacccccggctggacccgcgtgcgccga
ggcaagggctttgcctatgtgagcgccaccgggcgcgcgatccgcgacgccgcgcagctg
gaccgcatcaagcgcctggcgattccgcccgcctacaccgaggtgtggatctgccccagc
gcgcgcggccacctgcaggccacggggcgcgatgcgcggggccgcaagcaataccgctac
cacgccgagtggcaggcgcggcgcgagcagcagaagttcgaccgcatgcgcgagttcggc
cgcaccctgccgcgcatccgccgcgcggtgacgcgcgacctgcgcagccgcgaactgacg
caggacaccgtggtggccgccatcgtgcgcttgctggaccgcaccgcgctgcgcgtgggc
aatgaggcctacgcgacggagaacggttcgttcggcctgaccacgctgcgcgaccggcat
gtgcgcacgcgcgcggccagcctggagatccgcttccggggcaagagcggcgtggagcag
accgcgcggctcaccgacccggccaccgcccgcatcgtgcagcgctgccaggagttgccc
gggcagcacctgttccagtacatcgacgacgccgggcggcgccgaccggtgcgctcacaa
cacgtcaaccaatacctgcgccgcgtcagcggccacggcttcacggccaaggatttccgc
acctggcacgccagcgtgctcgcgctggaactgaccgccggggtgacgccatcggtgccc
ggggacgcggtggcgcccacgcgcgccaccgtggtcgaagtggtgcgccaggtcgcccgg
cagatcggcaacacgcaggcggtgtgccgccgcttctacatccacccggcggtgctgcag
gccgtgctcgacggcccggcgaggaaagaagagaaagccggcggcaccaccgaaagcgcg
ctgctgcgcctgctgtcgcgccgcaagaggaagaaggctcagccttcgtcgccgtcggcc
agcagagcgcgccagatcagcgcaccgatcgccgcaccgaccaggggcgccagccagaac
agccagagttga
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