Hydrogenophaga sp. ANAO-22: ABSY19_06425
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Entry
ABSY19_06425 CDS
T10785
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABSY19_06425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyda02000
]
ABSY19_06425
Transporters [BR:
hyda02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ABSY19_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
nSTAND_NTPase5
AAA_16
nSTAND3
AAA_29
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
XHM82879
LinkDB
All DBs
Position
complement(1368306..1369322)
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AA seq
338 aa
AA seq
DB search
MTVAVTLEAVSCVFGSGAQAVRAVDRVDLTIEGGEFFTLLGPSGSGKTTCLRMIGGFTLP
TSGRILIGGQDVSHLPPYARPVNTVFQDYALFPHMNIRDNVAYGLMVQGVDKSARHARAE
QMLDLVRLSGVGERRPGQLSGGQRQRVALARALINQPQVLLLDEPLGALDLKLREQMQTE
LKALQRQLGITFLFITHDQHEALSMSDRIGVFSNGRLEQVGAPQAIYNRPATRFVAEFVG
AANVFDGARAREIAGVDSVMLRPERIRLGTSPQARLSGAVIDAQYFGSFSRVRVDWGGEA
VSVDLNPELHPELPTPGDTVHLHWQADAVHPLQPGAAP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgctgtcaccctggaagctgtctcgtgcgtgttcggttccggcgcgcaggcc
gtgcgcgcggtcgaccgcgtggacctcaccatcgaaggcggggagttcttcaccttgctc
gggccttcgggctcgggcaagacgacctgcctgcgcatgatcggcggcttcacgctgccg
acctcgggccgcatcctcatcggcgggcaggacgtgtcgcacctgccgccgtacgcgcgg
ccggtgaacacggtgttccaggactacgcgctgttcccgcacatgaacatccgcgacaac
gtggcctacggcctgatggtgcagggcgttgacaagtcggcgcggcacgcgcgtgccgag
cagatgctggacctggtgcggctctcgggcgtgggcgagcgccgcccgggccagctctcg
ggtggccagcgccagcgcgtggcgctggcgcgcgcgctgatcaaccagccacaggtgctg
ctgctcgacgaaccgctgggcgcgctcgacctcaagctgcgcgagcagatgcagaccgag
ctgaaagccctgcagcggcagctgggcatcacctttctcttcatcacgcacgaccagcac
gaggcgctgtccatgagcgaccgcatcggcgtgttcagcaacggccggctggagcaggtg
ggtgcaccgcaggccatctacaaccgcccggccacgcgcttcgtggccgagttcgtgggc
gcggccaatgtgttcgacggcgcgcgggcgcgcgagatcgcgggcgtggacagcgtcatg
ctgcggcccgagcgcatccgcctgggcacctcgccgcaggcgcgcctgagcggcgcggtg
atcgatgcgcagtacttcggctcgttctcgcgcgtgcgggtggactggggcggcgaggcc
gtgtcggtggacctcaaccccgagctgcatcccgagctgcccacgccgggcgacacggtg
cacctgcactggcaggccgatgcggtgcacccgttgcagccaggcgcggcgccatga
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