Hydrogenophaga sp. ANAO-22: ABSY19_06755
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Entry
ABSY19_06755 CDS
T10785
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABSY19_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyda03019
]
ABSY19_06755
Enzymes [BR:
hyda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABSY19_06755
Messenger RNA biogenesis [BR:
hyda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABSY19_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHM82941
LinkDB
All DBs
Position
complement(1428389..1429882)
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AA seq
497 aa
AA seq
DB search
MTQSFSELSLSPAIERAVAEMGYATMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFTLP
LLQRMLKHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTNLRSTVVFGGMDMK
PQTAELKKGVEVLVATPGRLLDHIEAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLANSYLQDPVTIEVARSNATASTVEQHFYRVEDDDKRGIL
KQILRERGLKQAFVFVNSKLGCARLARSLEREGLNTTALHGDKSQDERLKALEAFKTGAV
DLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDTRL
MGDLEKLLGKKLELEALEFEADRRPAGRFNDGQRAWQQPEGQDAERRESRAIRESRESRT
PREARGASDSRPTRAPRAPADPLFDKPYEPSAASDATPSWEVSQRAAARTASPNIKTRRK
VPALFKSAPAPAPAQES
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatccttctccgaactctccctctcgcccgccattgagcgagccgtggccgaa
atgggctacgcgaccatgacgccgatccaggcgcaggcgattccggtggtgctgcaaggc
cgtgacgtgatgggcgccgcccagaccggcaccggcaagaccgccgcgttcacgctgccg
ctgctgcagcgcatgctcaagcacgagaacgcctcaacctcgcccgcgcgccacccggtg
cgcgccctggtgctgctgcccacgcgcgagctggccgaccaggtggccgagcaggtcaag
ctgtacgccaagtacaccaacctgcgcagcacagtggtgttcggcggcatggacatgaag
ccgcagacggccgagctcaagaagggcgtcgaggtgctggtggccacgcccgggcgcctg
ctggaccatatcgaggccaagaactgcgtgctcaaccaggtcgagtatgtggtgctcgac
gaggccgaccgcatgctggacatcggtttcctgcccgacctgcagcgcatcctgagctac
ctgcccaagcagcgcaccacgctgctgttctcggccaccttctcgcccgagatcaagcgc
ctggccaacagctacctgcaggacccggtgaccatcgaggtggcgcgctccaacgccacg
gcgtccaccgtggagcagcacttctaccgcgtggaagacgacgacaagcgcggcatcctc
aagcagatcctgcgcgagcgcggcctcaagcaggccttcgtgttcgtcaacagcaagctc
ggttgcgcgcgcctggcgcgttcgctggagcgcgaaggcctcaacaccacggccctgcac
ggcgacaagagccaggacgagcgcctcaaggccctggaagccttcaagaccggcgcggtg
gacctgctggtctgcaccgacgtggccgcgcgcggcctggacatcaaggacgtgccggcg
gtgttcaacttcgacatcccgttcaacgccgaggactacgtgcaccgcatcggccgcacc
ggccgtgcgggcgcttcgggcctggcggtgtcgttcgtgagcgggcgcgacacgcgcctc
atgggcgacctggaaaagctgctgggcaagaagctcgaactcgaagcgctggagttcgaa
gccgaccgccgcccggcgggccgcttcaacgacggccagcgcgcctggcagcagcccgaa
gggcaggacgccgagcgccgcgagagccgggccatccgcgagagccgcgagagccgcacc
ccgcgcgaagcgcgaggcgcctccgattcgcgcccgacccgcgcaccgcgcgcgccggcc
gatccgctgttcgacaagccctacgaacccagcgccgcgagcgacgccacgccctcgtgg
gaagtgtcgcagcgcgccgccgcgcgcacggcctcgcccaacatcaagacgcgccgcaag
gtgccggccttgttcaagagcgcccccgcaccggcgccggctcaggaaagctga
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