Hydrogenophaga sp. ANAO-22: ABSY19_09390
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Entry
ABSY19_09390 CDS
T10785
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda02020
Two-component system
hyda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABSY19_09390
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABSY19_09390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyda03021
]
ABSY19_09390
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hyda02035
]
ABSY19_09390
Transcription machinery [BR:
hyda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABSY19_09390
Bacterial motility proteins [BR:
hyda02035
]
Flagellar system
Flagellar assembly proteins
Stator
ABSY19_09390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
HTH_28
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
XHM83426
LinkDB
All DBs
Position
complement(1977656..1978372)
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGTLNRDDQLRKYSPLVRRLAHHMIAKLPPSVELDDLIQVGMIGLTEAIARFEPTQ
GVQFETFASQRIRGAMIDELREGDWMSRGSRKSQKDIEQAVHRLQQKLHRVPKESEIAAE
MGMSLADYQHLLAKVRGTQLVYLEDISGNSDDEDGFLDRHMGDHEADPSAVLQDHRMRTA
LVAAIKVLPEREQQIMSMYYEHDMNLKEIAAVLGVTESRICQLHSQSIARLRSKLRAH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaaggcaccctcaaccgggacgaccagttgcgcaaatacagcccgctg
gtgcgccgcctcgctcaccacatgatcgccaagctgccgcccagcgtggagctcgacgac
ctgatccaggtcggcatgatcggcctgaccgaagccatcgcgcgcttcgagcccacccag
ggcgtgcagttcgagaccttcgccagccagcgcatccgcggcgcgatgatcgacgaattg
cgcgagggcgactggatgtcgcgcggttcgcgcaagagccagaaagacatcgagcaggcc
gtgcaccgcctgcagcagaagctgcaccgcgtgcccaaggaaagcgagatcgccgccgag
atgggcatgagcctggccgactaccagcacctgctggccaaggtgcgcggcacccagctc
gtgtacctggaggacatcagcggcaacagcgacgacgaagacggcttcctggaccgccac
atgggcgaccacgaggccgacccctcggccgtgctgcaggaccaccgcatgcgcaccgcc
ctggtggccgccatcaaggtgctgcccgagcgcgagcagcagatcatgtcgatgtactac
gagcacgacatgaacctgaaggagatcgcggccgtactgggcgtgaccgagtcgcgcatc
tgccagttgcacagccagtccatcgcgcgcttgcgctccaagcttcgtgcgcattaa
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