Hydrogenophaga sp. ANAO-22: ABSY19_11265
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Entry
ABSY19_11265 CDS
T10785
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda03020
RNA polymerase
Brite
Enzymes [BR:
hyda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABSY19_11265 (rpoC)
Transcription machinery [BR:
hyda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABSY19_11265 (rpoC)
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABSY19_11265 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XHM83775
LinkDB
All DBs
Position
complement(2362130..2366350)
Genome browser
AA seq
1406 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIRIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLILDMTLRDIERVLYFEAYVIVDPGMTPLKKFAIMSEDDYDAKRKEFGDEFIAKM
GAEGIKELLQAIDLDIEIEKLRNDLTGSELKIKKNAKRLKVLEAFKKSGIKPEWMVLDVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNILFPANGEPSIVPSQDVVLGLYYATRERINAKGEGMYFADLAELQRALDNGVV
EITSKIAVRLTQHTLDKASGEFVASTSLVDTTVGRALLSEILPRGLPFEVLNKALKKKEI
SRLINTSFRKCGLKETVVFADKLLQNGFRLATRAGISIAVDDMLVPKEKPAIIDRAENEV
KEIAQQYASGLVTAGERYNKVVDIWGKAGDEISKVMMAQLAKQKTTDRSGKEVDQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVNQQDCGTSNGTLMRAIVEGGEVIESLRDRILG
RTTAEEVIHPETRQMLVPAGEMLDEDLLDVLEAAAVDEVKVRTALTCETRFGICAKCYGR
DLGRGGLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSSGVIGFN
ATMRYVTNTKGELVVIARSGEIVIHDEHGRERERHKVPYGAILSVKADQTIKAGAILANW
DPLTRPIITEFAGQVKFENVEEGLTVAKQVDDVTGLSTLVVIDPKRRGVAKVVRPQVKLI
DGSGNEVKIPGTDHSVTIGFQIGSLIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEMTGTVSFGKETKGKVRLQITDPEGKVWDDLIPKEKNILVHEGQ
VVNKGESVVDGPADPQDILRLLGMEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVEGVGDSSYIAGEQVERSEILNTNDALRAEGKIPATYSNILLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHEARKVKEKMDDEERRA
IAEADAISLAADQADQADASSTHDAE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttgctcgacctgttcaagcagttcacgcccgacgagcacttcgatgcgatc
cgcatcggcctggcctcgccggaaaaaatccgctcgtggtccttcggtgaagtcaagaag
cccgagaccatcaactaccgcacgttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggtcccatcaaggactacgaatgcctgtgcggcaagtacaagcgcctcaagcac
cgcggtgtcatctgcgagaagtgcggcgttgaagtcacgcagaccaaggtgcgtcgcgag
cgcatgggtcacatcgacctggccgcgccctgcgcccacatctggttcctgaagtcgctg
ccgtcgcgcctgggcctgatcctggacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcgtatgtgatcgtcgatccaggcatgaccccgctgaagaagttcgcgatcatg
agcgaggacgactacgacgccaagcgcaaggaattcggcgacgaattcatcgccaagatg
ggcgccgagggcatcaaggaactgctgcaggcgatcgacctcgacatcgagatcgagaag
ctgcgcaatgacctgaccggctccgaactcaagatcaagaagaacgccaagcgcctgaag
gtgctggaagccttcaagaagtccggcatcaagcccgagtggatggtgctcgacgtgctg
cccgtgttgccgccggacctgcgtccgctggtgccgctggacggcggtcgcttcgcgacc
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacagccgcctgcgccgcctg
ctcgaactcaaggcgcccgagatcatcgcgcgcaacgagaagcgcatgctgcaggaagcc
gtggactcgctgctggacaacggccgccgtggcaaggccatgacgggcgccaacaagcgc
gcgctgaagtcgctggccgacatgatcaagggcaagagcggccgcttccgccagaacttg
ctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggccccacgctcaag
ctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaagcctttcatcttc
tcgcgcctggaagccatgggcatcgcgaccaccatcaaggccgcgaagaaggaagtggaa
gccggcacgccggtggtgtgggacatcctggaagaggtgatcaaggaacacccggtgatg
ctcaaccgcgcaccgacgctgcaccgcctgggcatccaggcgttcgagccgatcctgatc
gaaggcaaggcgatccagctgcacccgctggtctgcgcggccttcaacgccgacttcgac
ggtgaccagatggccgttcacgtgccgctgtccgtggaagcccagctcgaagcccgcacg
ctgatgctggcctcgaacaacatcctgttcccggccaacggcgaaccctccatcgtgccg
tcgcaagacgtggtgctgggtctgtactacgccacccgcgagcgcatcaacgccaagggc
gaaggcatgtacttcgccgacctggccgagctgcagcgcgcgctggacaacggtgtggtc
gagatcacctcaaagattgccgtgcgcctgacccagcacacgctggacaaggccagcggc
gagttcgtggcctccacctcgctggtggacaccacggttggtcgtgcgctgctgtccgag
atcctgccgcgtggcctgcccttcgaggtgctgaacaaggcgctgaaaaagaaggaaatc
tcgcgcctgatcaacacctcgttccgcaagtgcggtctgaaggaaaccgtcgtgttcgcc
gacaagctgctccagaacggtttccgtctggccacgcgcgccggcatctcgatcgccgtg
gacgacatgctggtgcccaaggaaaagccggccatcatcgaccgcgccgaaaacgaggtg
aaggaaatcgcccagcagtacgcctccggtctggtgaccgcgggcgagcgctacaacaag
gtggtggacatctggggcaaggccggtgacgagatctccaaggtcatgatggcccagctg
gccaagcagaagaccaccgaccgcagcggcaaggaagtggaccaggagtcgttcaactcc
atctacatgatggccgactcgggcgcccgcggttccgcggcgcagatccgccagctggcc
ggcatgcgcggcctgatggccaagcctgacggctcgatcattgagacccccatcacggcg
aacttccgtgaaggcctcaacgtgttgcagtacttcatctccacccacggcgcccgaaag
ggtctggccgacacggcgctgaagacggccaactccggctacctcacccgccgtctggtg
gatgtgacgcaggatctggtggtcaaccagcaggactgcggcacgtccaatggcacgctg
atgcgcgccatcgtcgaaggcggtgaagtgatcgagtcgctgcgcgaccgcatcctgggc
cgcaccacggcggaggaagtgatccacccggaaacgcgccagatgctggtgcccgccggc
gagatgctcgacgaagacctgctcgacgtgctcgaagccgccgcggtggacgaagtgaag
gtgcgcaccgcactgacctgcgaaacccgcttcggcatctgcgccaagtgctacggccgc
gacctgggccgcggtggcctggtcaacatcggcgaagcggtcggcgtgatcgccgcgcag
tcgatcggtgaacccggcacgcagctgaccatgcgcaccttccacatcggtggtgcggcg
tcgcgcgcggcggtggcctccagcgtggaagccaagtccagcggcgtgatcggcttcaac
gccaccatgcgctacgtgaccaacaccaagggtgagctggtcgtgatcgcgcgttcgggc
gagatcgtcatccacgacgaacacggccgtgagcgcgagcgccacaaggtgccttacggt
gcgatcctgtcggtcaaggccgaccagaccatcaaggccggtgcgatcctggccaactgg
gatccgctgacgcgcccgatcatcacggaattcgccggtcaggtgaagttcgagaacgtc
gaggaaggcctcaccgtggccaagcaggtggacgatgtcaccggcctgtccaccctggtg
gtgatcgatccgaagcgccggggcgtggccaaggtggttcgtccgcaggtcaagctgatc
gacggctcgggcaacgaggtgaagatccccggcaccgaccactcggtgaccattggcttc
cagatcggctcgctgatccaggtgcgcgatggccaggacgtgggccccggcgaagtgctg
gcgcgcatcccggtcgaaggccagaagacgcgagacatcaccggcggtctgccgcgggtg
gccgagctgttcgaagcccgcagcccgaaggacaagggcatgctggccgagatgaccggc
accgtgtcgttcggcaaggagaccaagggcaaggttcgcctgcagatcaccgaccccgaa
ggcaaggtgtgggacgacctcatccccaaggaaaagaacatcctggtgcacgaaggccag
gtggtcaacaagggcgagagcgtggtggacggcccggccgatccgcaagacatcctgcgc
ctgctgggcatggaagagctggcccgctacatcgtcgacgaagtgcaggacgtctaccgc
ctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgc
cgtgtcgtggtcgagggcgtgggcgattcgagctacatcgcgggtgaacaggtggagcgt
tcggagatcctcaacaccaacgacgccctgcgcgccgaaggcaagatccccgcgacctac
agcaacatcctgctgggcatcacgaaggcctcgctgtccaccgactcgttcatctcggcg
gcttccttccaggaaaccacccgggtgctgaccgaagcggccatcatgggcaagcgcgac
gagctgcgtggtctgaaggaaaacgtgatcgtgggtcgtctgatcccggccgggaccggc
atggcctaccacgaggcgcgcaaggtcaaggagaagatggacgacgaagaacgccgtgcc
atcgccgaagccgacgcgatctcgctggctgccgaccaggccgatcaggccgacgcatcg
agcacccacgacgccgagtaa
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