Hydrogenophaga sp. ANAO-22: ABSY19_11490 Help Entry ABSY19_11490      CDS       T10785                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism hyda  Hydrogenophaga sp. ANAO-22 Pathway hyda02020   Two-component system hyda02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hyda00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     ABSY19_11490 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     ABSY19_11490 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hyda03021]     ABSY19_11490 (rpoN) Transcription machinery [BR:hyda03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      ABSY19_11490 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_23 Motif Other DBs NCBI-ProteinID:  XHM83811 LinkDB All DBs Position complement(2406219..2407835) Genome browser AA seq 538 aa AA seqDB search MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLEMAQEVEQMLDDNPFLERAEEIAERETFG LEQTDVPVSAGEQIAEAALPEAPVPLSPSLESSSASTDSGDGDGLESKLDGATPVEESWE GDGTVEMAPDDSEWGGDAPARNSGSGDNDETASAADLARAPVSLQDHLHDQARCLRLSDE DRAALYFLIESLNDDGYLEESLAELADAWLHLSGTPQLAGDPNDALEAREALEQRLAVAL QLLQHMEPSGVGARDLGECLRLQILELRNTAEARAALAICNQPLELMAKRDVKRLCNLCG IDDETARAALGLIARLEPKPGRRFVDVERNVVVPDVIVTRAGRGFKVILNPDVMPRLRVH DVYANAMRQNRGGGEAGHAAMQQRLQEARWFIKNIQQRFDTILRVSSAIVERQRNFFMHG ELAMRPLVLREIADELGLHESTISRVTTAKYMATPFGTYELKYFFGSSLGTETGGNASST AVRALLKQFIAAEEPAKPLSDNQLSDLLREQGIECARRTVAKYREALRIAPANLRKAL NT seq 1617 nt NT seq  +upstreamnt  +downstreamnt gtgaaacaaggcctgtcactgcgcgtctcgcagcacctggcgctcacgccccagctgcag cagtcgatccggctgctgcagctgtccacgctggagatggcgcaggaagtcgagcagatg ctcgacgacaaccccttcctcgagcgcgcggaggaaatcgccgagcgcgagaccttcggg ctggagcagaccgatgtgccggtgagcgccggcgagcagatcgccgaggcggccctgccc gaggcgccggtgcccttgtccccttccctcgaatcctccagcgcgagcaccgacagcggt gacggcgatggcctggaaagcaagctggacggcgccaccccggtggaggaaagctgggag ggcgacggcacggtggagatggcgcccgacgacagcgagtggggtggcgacgcgcccgcg cgcaacagcggttcgggcgacaacgacgagaccgccagcgccgccgacctggcgcgcgcc ccggtcagcctgcaggaccacctgcacgaccaggcgcgctgcctgcgcctgtcggacgag gaccgcgccgcgctctacttcctgatcgagtcgctcaacgacgacggttacctggaggaa agcctggccgagctggccgacgcctggctgcacctctcgggcacgccccagctcgcgggc gacccgaacgacgcgctggaggcgcgcgaggcgctggagcagcgcctcgcggtggcgctg cagctgctgcagcacatggagccctcgggcgtgggcgcgcgcgacctgggcgaatgcctg cgcctgcagatcctggagctgcgcaacacggccgaggcgcgcgccgcgctcgccatctgc aaccagccgctggagctcatggccaagcgcgacgtgaagcgcctgtgcaacctctgcggc atcgacgacgagaccgcgcgcgccgcgctcggcctgatcgcgcgcctcgaacccaagccg ggccgccgcttcgtcgacgtggagcgcaacgtggtcgtgcccgacgtgatcgtcacgcgc gccggccggggcttcaaggtcatcctcaatcccgacgtgatgccgcgcttgcgcgtgcac gatgtctacgccaacgccatgcggcagaaccgcggcggtggcgaggccggccacgccgcc atgcagcagcgcctgcaggaggcgcgctggttcatcaagaacatccagcagcgcttcgac accatcctgcgcgtctccagcgccatcgtcgagcgccagcgcaacttcttcatgcacggc gaactcgccatgcgcccgctggtgctgcgcgagatcgccgacgaactcggcctgcacgaa tccaccatcagccgcgtgaccaccgccaagtacatggccacgcccttcggcacctacgag ctcaagtacttcttcggctcgtcgctgggcaccgagaccggcggcaacgcctccagcacg gcggtgcgcgcgctgctcaagcagttcatcgccgccgaggagcccgccaagccgctgtcg gacaaccagctctccgacctgctgcgcgagcagggcatcgagtgcgcgcgccgcacggtg gccaaataccgcgaggcgctgcgcatcgcgcccgcgaacctgcgcaaagcactgtga

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