Hydrogenophaga sp. ANAO-22: ABSY19_12815
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Entry
ABSY19_12815 CDS
T10785
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda00521
Streptomycin biosynthesis
hyda00523
Polyketide sugar unit biosynthesis
hyda00525
Acarbose and validamycin biosynthesis
hyda00541
Biosynthesis of various nucleotide sugars
hyda01055
Biosynthesis of vancomycin group antibiotics
hyda01100
Metabolic pathways
hyda01110
Biosynthesis of secondary metabolites
hyda01250
Biosynthesis of nucleotide sugars
Module
hyda_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABSY19_12815 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABSY19_12815 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ABSY19_12815 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ABSY19_12815 (rfbB)
00525 Acarbose and validamycin biosynthesis
ABSY19_12815 (rfbB)
Enzymes [BR:
hyda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ABSY19_12815 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
XHM84062
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All DBs
Position
2655077..2656138
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLALHDEPVINLDKLTYAGNPETLSSLQGDARHRFVQGDIGD
SALVSRLMTEYRPRAVVHFAAESHVDRSIHGAEDFIQTNILGTFRLLEAVRTHWSALPAS
HKADFRFLHVSTDEVYGSLAPGAPAFNETHAYEPNSPYSASKAASDHLVRAWHHTHGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GRVGETYNVGGWNEKPNIEIVHTICALLDDLRPRADGASYTTQITHVKDRPGHDRRYAID
ARKLEAELGWKPAETFETGIRKTVQWYLEHGDWVAHVQSGAYRQWITSHYEAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattctggttactggtggtgccggcttcatcggcgccaacttcgtgctcgactggctg
gcgctccacgacgagccggtcatcaaccttgacaagctcacctacgcgggcaaccccgag
accctgtccagcctgcagggggacgcccggcaccgcttcgtgcagggggacatcggcgac
agcgcgctggtcagccggctcatgaccgaataccggccccgtgcggtggtccatttcgcg
gccgaaagccacgtggaccggtccatccacggcgcagaggatttcatccagaccaacatc
ctgggcaccttccgtcttctggaggcggtgcgcacccactggtcggctctgcccgcatcc
cacaaggccgacttccgcttcctgcacgtgagcaccgacgaggtgtatggcagcctggca
cccggcgccccggcgttcaacgaaacccatgcctacgagccgaacagcccctattccgcc
agcaaggcggccagtgaccacctggtgcgcgcgtggcaccacacccatggtctgccggtg
ctgaccacaaactgcagcaacaactacgggccattccatttccccgagaagctcattccg
ctcatgatcgtcaacgcgctcgcgggcaaacccctgccggtgtacggtgacggcatgcag
gtgcgcgactggctgtatgtgaaggaccactgcagcgcgatccgacgcgtgctcgaagcc
ggtcgggtgggtgagacctacaatgtggggggctggaacgagaagcccaatatcgagatc
gtgcacacgatctgcgccctgctcgacgacctgcgcccgcgcgccgacggtgcttcgtat
accacccagatcacccatgtcaaagaccgcccgggtcacgacaggcgctatgccatcgat
gcccgcaagctggaagccgagctcggctggaagcctgccgaaaccttcgagaccggcatc
cgcaagaccgtgcagtggtaccttgagcacggcgactgggtggcccatgtgcagagcggc
gcctatcggcaatggatcacctcgcactacgaagcggcctga
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