Hydrogenophaga sp. ANAO-22: ABSY19_17125
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Entry
ABSY19_17125 CDS
T10785
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda03030
DNA replication
hyda03430
Mismatch repair
hyda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABSY19_17125
03430 Mismatch repair
ABSY19_17125
03440 Homologous recombination
ABSY19_17125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyda03032
]
ABSY19_17125
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_17125
Enzymes [BR:
hyda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABSY19_17125
DNA replication proteins [BR:
hyda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABSY19_17125
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABSY19_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
XHM79577
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All DBs
Position
3550819..3551712
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AA seq
297 aa
AA seq
DB search
MARRLEHDPDFRVLRRLVPLMDFGPPPLAAQVRRVLVLDTETTGLSHQADKIIELAMLLV
DVDLASGLPFGPVTLFEGFEDPGMPIPAVAQQVTGISDDMVAGHRLDDAQVEALVARADL
IVAHNAGFDRPFVEARFPGFAAKAWACSFADIDWKAAGAESAKLSALAQNHGWFYDAHRA
QVDCHALLQVLSRPVGPQGPATGLNRLISVAAQASFKLRATGSPFESKDLLKARGYRWDG
DAKVWYCTLADQERLDAELEWLKAEVYGRRQARVEIEALDGLVRYSARPGVVSQRGL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcggctggagcacgaccccgacttccgcgtcctgcgccgactcgtccccctc
atggacttcggccccccgccgctggccgcgcaggtccggcgggtgctggtgctcgacacc
gagaccaccggcctgtcgcaccaggccgacaagatcatcgaactggccatgctgctggtg
gacgtggacctcgcctcgggcctgccgttcgggccggtgacgctgttcgaaggctttgaa
gaccccggcatgccgatcccggccgtggcccagcaggtaaccggcatcagcgacgacatg
gtggccgggcaccggctggacgatgcgcaggtcgaggccctggtggcccgggccgatctc
atcgtggcgcacaacgccggcttcgaccgccctttcgtggaagcgcgcttccccggcttc
gcggccaaggcctgggcctgctccttcgcggacatcgactggaaggccgcgggcgccgag
tcggccaagctcagcgcgctggcgcagaaccacggctggttctacgacgcccaccgcgcg
caggtggattgccacgccctgctgcaggtgctctcgcggcccgtgggcccgcagggcccg
gccaccggcctgaaccggctgatctcggtggcggcccaggccagcttcaagctgcgcgcc
accggctcgccgttcgagtccaaggacctgctcaaggcccggggctaccggtgggacggc
gatgccaaggtctggtactgcaccctggccgaccaggaacgcctggacgccgaactcgaa
tggctcaaggccgaggtctatggccggcgccaggcgcgcgtggagatcgaggccctggac
ggcctggtgcgctactcggccagaccgggcgtggtgtcgcaaagagggctgtaa
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