Hydrogenophaga sp. ANAO-22: ABSY19_18620
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Entry
ABSY19_18620 CDS
T10785
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda00300
Lysine biosynthesis
hyda00470
D-Amino acid metabolism
hyda01100
Metabolic pathways
hyda01110
Biosynthesis of secondary metabolites
hyda01120
Microbial metabolism in diverse environments
hyda01230
Biosynthesis of amino acids
Module
hyda_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABSY19_18620 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABSY19_18620 (dapF)
Enzymes [BR:
hyda01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABSY19_18620 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XHM79855
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Position
3867706..3868581
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AA seq
291 aa
AA seq
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MHIRFTKMQGAGNDFVVLDETRGRLGLSAAQYRFLADRHFGVGADQILSVRASPGRGLDF
EYVIHNADGGQVEQCGNGARCFVRYVHDKGLSAKNPLRVKVMNAELELKMHTDGRVTVDM
SPPVFALDRVPFNAEGLTPEPMGGFERWPLALPYAGDVPVAVLSMGNPHAVLLVDDVQAA
PVPSWGPWIETHERFPRRVNAGFLQVVSRSEVRLRVHERGAGETLACGTGACAAVVAGIR
LGLLDERVDVHTRGGVLTIEWKDTLSHDQPVFMTGPATTVFDGEIDIPDLA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccgattcaccaagatgcagggcgccggcaacgatttcgtcgtgcttgacgag
acgcgaggccgcctgggcctgagcgccgcgcagtaccgctttctggctgaccgccacttt
ggtgtcggtgccgaccagatcctcagcgtgcgcgcctcgcctgggcgcgggctggacttc
gagtacgtgatccacaacgccgatggcggccaggtggaacaatgcggcaacggcgcgcgc
tgcttcgtgcgctacgtgcacgacaagggcctgagcgcgaagaacccgctgcgcgtgaag
gtgatgaatgccgagctggaactgaagatgcacaccgatggccgcgtgacggtggacatg
agccccccggtgttcgcgctcgatcgcgtgcctttcaacgccgagggcctcacgcccgag
cccatgggcggcttcgagcgctggccactggcactgccctatgccggcgatgtgccggtg
gccgtgctctccatgggcaacccgcacgcggtgctgctggtggacgacgtgcaggccgcg
ccggtgccgtcctggggcccctggatcgaaacgcacgaacgctttccccgccgcgtcaac
gccggtttcctgcaggtcgtcagccgcagcgaggtgcgcctgcgcgtgcacgagcgcggc
gcgggcgagaccctggcctgcggcacgggcgcctgcgccgccgtggtggccggcatccgg
ctgggcctgctcgacgagcgggtggacgtgcacacccggggcggcgtgctcaccatcgag
tggaaggacaccctcagccacgaccagccggttttcatgaccggccccgccaccaccgtt
ttcgacggtgagatcgacatccccgacctcgcctga
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