Hydrogenophaga sp. ANAO-22: ABSY19_18870
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Entry
ABSY19_18870 CDS
T10785
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABSY19_18870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hyda02022
]
ABSY19_18870
02035 Bacterial motility proteins [BR:
hyda02035
]
ABSY19_18870
Two-component system [BR:
hyda02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ABSY19_18870
Bacterial motility proteins [BR:
hyda02035
]
Pilus system
Twitching motility proteins
ABSY19_18870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA
HTH_30
AAA_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XHM79900
LinkDB
All DBs
Position
complement(3924220..3925728)
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AA seq
502 aa
AA seq
DB search
MATAPSSASVLVVDDEPDLRTLYELTLLREGHAVVAAPDITQAREWLAQQRFDVLISDMR
LPDGLGLDLLRELADAQRPEKCIVITAYGSAENAVESLKAGAFDYLTKPVDLKQLRSAVT
AALQSQRGSPAAMANGATAPAPNASGAGDALRKPAATSSGAQSLRRIVGASPSIAQIKSR
IEKVASSMAPVLILGESGTGKELVARAVHDCSHRSGGPFVAVNCGAIPENLIEAEFFGAR
KGAYTGATTDREGYFQAARGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGGVQEEAVD
VRLVSATHRDLNALVQSGQFRQDLFYRLNVIGLRSPALRERREDLPLLVEALLARLCAES
GQNVPRVSARALAWLQSRELPGNVRELENLLQRALALSSGEVLEPDDFGEADETEVPTQP
DQLAPADGLGAPMTRPPEEIPADLQTYLDEQERQVLLKALRECDFNRTAAAARLGLNLRQ
MRYRIQRLGIAMPSDDDDTTTA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccccctcctccgcctccgtgctggtcgtcgacgacgaacccgatctgcgc
acgctgtacgagctcaccctgctgcgcgaaggccatgcggtggtggccgcgccggacatc
acccaggcgcgcgaatggctcgcccagcagcgcttcgacgtgctgatctccgacatgcgc
ctgcccgacggcctgggcctggacctgctgcgcgaactcgcggacgcccagcggcctgaa
aaatgcatcgtcatcaccgcgtacggatcggcagaaaacgcggtggagtcgctcaaggcc
ggcgccttcgactacctcaccaaaccggtggacctcaaacagctgcgcagcgcggtgacg
gcggcgctgcaaagccagcgcgggtccccggccgccatggccaacggcgcgacggcgccc
gcgcccaacgccagcggcgcgggcgacgccctcagaaaaccagccgccacctccagtggc
gcgcaatcgctgcgccgcatcgtgggcgcctcgcccagcatcgcgcagatcaagtcgcgc
atcgagaaggtggcctccagcatggcgccggtgctcatcctgggcgagtccggcacgggc
aaggaactggtggcgcgcgcggtgcacgactgcagccaccgcagcggcgggccgttcgtg
gcggtcaactgcggcgcgatcccggaaaacctgatcgaggccgaattcttcggcgcgcgc
aagggcgcctacaccggcgccaccaccgaccgcgaaggctacttccaggcggcgcggggc
ggcaccttgttcctcgatgaaatcggcgacctgcccctggccatgcaggccaagctgctg
cgcgtgatccaggagcgccgcgtgcgcgcgcttggcggcgtgcaggaagaagccgtcgac
gtgcggctggtgagcgccacccaccgcgacctcaacgcgctcgtgcagtcgggccagttc
cgccaggacctgttctaccgcctcaacgtcatcggcctgcgctcgcctgcgctgcgggaa
cggcgcgaagacctgcctctgctggtggaggctctgctggcgcggctgtgcgccgaatcc
gggcaaaacgtgcccagggtgtcggcccgcgccctggcctggctgcagtcgcgcgaactg
ccgggcaatgtgcgcgagctcgagaacctgttgcagcgcgccctggccctgagcagcggc
gaggtgctcgaaccggacgacttcggcgaggccgacgagaccgaagtgcccacccagccc
gaccagctcgcgcccgccgatggcctcggcgcacccatgacccgcccgcccgaagagatt
cccgccgacctgcagacctacctggacgaacaggagcgccaggtgctgctcaaggcgctg
cgcgaatgcgacttcaaccgcaccgcggccgcggcccgcctgggcctgaacctgcgccag
atgcgctaccgcatccagcggctgggcatcgccatgccgtcggacgatgacgacaccacc
acggcctga
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