Hydrogenophaga sp. ANAO-22: ABSY19_18955
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Entry
ABSY19_18955 CDS
T10785
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyda03016
]
ABSY19_18955 (miaB)
Enzymes [BR:
hyda01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ABSY19_18955 (miaB)
Transfer RNA biogenesis [BR:
hyda03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ABSY19_18955 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
XHM79917
LinkDB
All DBs
Position
complement(3944417..3945841)
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AA seq
474 aa
AA seq
DB search
MSKKVFIKTFGCQMNEYDSDKMADVLGAAQGYEPTQDVEEADLILFNTCSVREKAQEKVF
SDLGRVKHLKEKGVLIGVGGCVASQEGAEIIKRAPYVDVVFGPQTLHRLPELLNQRARQA
LPQVDISFPEIEKFDHLPPAKVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVL
VEVAGLADQGVKEVTLLGQNVNAYRGAMGETSEIADFALLLEYVAEIPGIERIRYTTSHP
NEFTPRLIEAYGKIPQLVNHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPELA
MSSDFIVGFPGETEDDFQKMMRLITDVGFDTSFSFIFSPRPGTPAANLTDDTPHEVKLQR
LQHLQAVVEENVRRISASREGTVQRILVEGRSRRPGKHGEIELMGRTECNRIVNFDGGPR
AERLIGQMLDVRITEARPHSLRGSLEITPAALRATPSMGQHLPPGKAGSAVFLD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaagtcttcatcaaaaccttcggctgccagatgaacgagtacgactcggac
aagatggccgacgtgctgggcgccgcgcaaggctacgagcccacgcaggacgtggaagag
gccgacctgatcctcttcaacacctgctcggtgcgcgagaaggcgcaagagaaggtgttc
agcgacctcggccgcgtcaagcacctcaaggaaaagggcgtgctgatcggcgtcggcggc
tgcgtggccagccaggaaggcgccgagatcatcaagcgcgcgccttatgtggacgtggtg
ttcggcccgcagaccctgcaccgcctgcccgagctgctcaaccagcgcgcgcgccaggcg
ctgccgcaggtggacatcagcttccccgagatcgagaagttcgaccacctgccgccggcc
aaggtcgagggtgcctcggccttcgtgtccatcatggaaggctgctccaagtactgcagc
tactgtgtcgtgccctacacgcgcggcgaagaggtcagccgcccgttcgacgacgtgttg
gtggaggtcgcgggcctggccgaccagggcgtgaaggaagtgaccctgctgggccagaac
gtgaacgcctaccgcggtgcgatgggcgagaccagcgagatcgccgacttcgccctgctg
ctggagtacgtggccgagatccccggcatcgagcgcatccgctacaccaccagccacccc
aacgagttcacgccgcgcctgatcgaggcctacggcaagatcccgcagctggtgaaccac
ctgcacctgccggtgcagcacggcagcgaccgcatcctgatggcgatgaagcgcggctac
accgccatggaatacaagagcaccgtccgcaagctgcgcgcgatccggcccgagctggcc
atgagcagcgacttcatcgtcggcttccccggcgagaccgaggacgacttccagaagatg
atgaggctcatcaccgacgtgggtttcgacaccagcttcagcttcatcttcagcccgcgc
cccggcacgccggcggccaacctcaccgacgacacgccgcacgaggtcaagctgcagcgg
ctgcagcacctgcaggccgtcgtcgaggagaacgtgcggcgcatcagcgccagccgcgag
ggcacggtgcagcgcatcctggtggaaggccgctcgcgccgccccggcaagcacggcgag
atcgagctgatgggccgcaccgaatgcaaccgcatcgtcaacttcgacggtggcccgcgg
gccgagcgcctgattggccagatgctcgacgtgcgcatcaccgaggcccgcccgcattcg
ctgcgcggcagtctggaaatcacccccgccgcgctgcgcgcgaccccctcgatggggcaa
cacctgccgcccggcaaagccggttccgcggtgtttctggattga
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