Hydrogenophaga sp. ANAO-22: ABSY19_19695
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Entry
ABSY19_19695 CDS
T10785
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda03410
Base excision repair
hyda03430
Mismatch repair
hyda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSY19_19695 (recJ)
03430 Mismatch repair
ABSY19_19695 (recJ)
03440 Homologous recombination
ABSY19_19695 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_19695 (recJ)
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABSY19_19695 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABSY19_19695 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABSY19_19695 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Peripla_BP_6
Glyco_transf_4
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
XHM80053
LinkDB
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Position
complement(4097250..4098986)
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AA seq
578 aa
AA seq
DB search
MKIITRDVPPRAAWALEQSGLHPLLARLFAARGITSKDELDDALARLLPPSSMLGAQEAA
RALADAMAAGKSICIVADYDCDGATACAVGLRGLRLLGAPLGFDRVNYLVPDRVTDGYGL
TPSIAKRVKAQGADVLVTVDNGIASVNGVRAARELGLDVIVTDHHLPALKDGEIALPVDC
IIVNPNQPGCAFESKSIAGVGVMFYVLLALRAELRERGVFTAQNQPKIDTLLPLVALGTV
ADVVKLDANNRRLVAQGLKRVRAGAMPPGMTALFNAAARKPAAATGFDFGFALGPRLNAA
GRLADMTLGIECLTTEDALRADELARTLDGINRERKAIEGDMREQALQMAEEMFDESEEP
PPALVVFDPDFHEGVVGIVASRLKDKLHRPTFVFAASGAEGKEHELKGSGRSIAGFHLRD
ALDLVAKRHPGVLLRFGGHAMAAGCTIDEEQLETFEAALQQVAHEWLDAATLQRRMEADG
PLDTKYRRADLVDTLHQEVWGQGFAPPVFCEEVVVVSQRLVGEKHLALKLKHQGEPVDGI
WFGHTEPLPQRVKIAFRLDADEWQGQRRVRFLVEAAEV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatcacccgcgacgtgcctccccgtgccgcctgggcgctggagcaaagcggc
ctgcaccccctgctggcgcgcctgttcgccgcgcgcggcatcaccagcaaggacgagctc
gacgacgcgctcgcgcgcctgctgccgccgtcctcgatgctcggcgcccaggaggccgcg
cgcgccttggccgacgcgatggccgccggcaagtccatctgcatcgtggccgactacgac
tgcgacggcgccaccgcctgcgcggtcggcctgcgcggcctgcgcctgctgggcgcgccc
ctgggtttcgaccgcgtgaactacctggtgcccgaccgcgtgacggacggctatggcctc
acgccctcgatcgcgaagcgcgtgaaggcccagggcgccgacgtgctggtgacggtggac
aacggcatcgccagcgtgaacggtgtgcgcgccgcgcgcgagctgggcctggacgtgatc
gtgaccgaccaccacctgcccgcgctgaaggacggcgagatcgccctgccggtggactgc
atcatcgtcaaccccaaccagccgggctgcgccttcgagagcaagtcgatcgcgggggtg
ggcgtgatgttctacgtgctgctggcgctgcgggccgagctgcgcgagcgcggtgtgttc
acggcgcagaaccagcccaagatcgacaccctgctgccgctggtggcgctggggaccgtg
gccgacgtggtcaagctcgacgccaacaaccgccgcctggtggcgcagggcttgaagcgg
gtgcgcgcgggtgcgatgccgccgggcatgacggcgctgttcaacgccgccgcgcgcaag
ccggccgccgccaccggtttcgacttcggcttcgccctgggcccacgcctgaacgcggcg
ggccgcctggccgacatgacgctgggcatcgagtgcctgaccaccgaggacgcgctgcgc
gccgacgaactggcgcgcacgctggacggcatcaaccgcgagcgcaaggcgatcgagggc
gacatgcgcgagcaggccttgcagatggccgaggagatgttcgacgaatcggaggagccg
ccgcctgcgctggtggtgttcgaccccgatttccacgagggcgtggtcggcatcgtggcc
tcgcggctgaaggacaagctgcaccgccccaccttcgtgttcgccgccagcggcgccgag
ggcaaggagcacgagctcaagggctcggggcgctcgatcgcgggttttcatctgcgcgat
gcgctcgacctggtggccaagcggcatccgggggtgttgttgcggtttggtggccatgcg
atggcggcgggctgcacgatcgatgaggagcagctggagactttcgaggcggccttgcag
caggtggcgcacgagtggctggacgccgcgacgttgcagcgccgcatggaggcggacggg
ccgctggacacgaagtaccggcgcgcggatctggtggacacgttgcaccaggaggtgtgg
ggtcaggggttcgcgccgccggtgttctgcgaggaggtggtggtggtgtcgcagcgtctc
gtgggcgagaagcacctggcgttgaagctcaagcaccagggtgaaccggtggacggcatc
tggttcggccacacggagccgctgccgcagcgggtgaagatcgctttccggttggatgcg
gatgagtggcaggggcagcggcgggtccggtttctggtggaggctgctgaggtttga
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