Hydrogenophaga sp. ANAO-22: ABSY19_20905
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Entry
ABSY19_20905 CDS
T10785
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda00061
Fatty acid biosynthesis
hyda00071
Fatty acid degradation
hyda01100
Metabolic pathways
hyda01212
Fatty acid metabolism
hyda02024
Quorum sensing
hyda04146
Peroxisome
Module
hyda_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABSY19_20905
00071 Fatty acid degradation
ABSY19_20905
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABSY19_20905
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABSY19_20905
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyda01004
]
ABSY19_20905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyda04147
]
ABSY19_20905
Enzymes [BR:
hyda01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABSY19_20905
Lipid biosynthesis proteins [BR:
hyda01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABSY19_20905
Exosome [BR:
hyda04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABSY19_20905
Exosomal proteins of breast cancer cells
ABSY19_20905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XHM80278
LinkDB
All DBs
Position
4330543..4332135
Genome browser
AA seq
530 aa
AA seq
DB search
MSPSTSVIADVPSPGAIARVAIGDFLRRSAARDRAKTAFVLGDQSMSYGELDERVTRCAN
ALLAAGLVRGDRVTTLCNNSLEFLVAMFGIHRAGLIWVPINTGLGLDDVRYIIDHSEARF
LLVDAALLVRPELRAAIEAQPGRGWVLEGEGAGAFCSFAAAIAAQSATESEVEIHDRDVA
QIMYTSGTTGRPKGVMQSHLSVVMAAMNNALELGVWRDAVNIAVLPLFHCAQHTLMCGVL
AGGGTVIVMRAFEPAAMLDAIERERVTLLVGLPLMHQAMLDHPSRPGRDLSSLRMCVYAM
APMAETLLRRLIAEFCPNYSLATGQTEMYPLTMAFRPEEQLKRFGSYWGASALINDTAVM
DDAGQLLGPGEVGEIVHRGPNVMEGYYKNPEATAEARAFGWHHTGDLGMWVDGQMMFRDR
KKDMIKTGGENVPSIKVEATLLRHPAVANVAAVGLPHPRWVEAVTAFVVLKPGAQADEAE
LINHCKEHLGGFEVPKAIRIVDALPMTSTGKIQKHPLRDSYRALYEDIER
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagcccatcaacctccgtcatcgctgatgtgccatcccctggcgcaattgcccgcgtg
gccatcggcgacttcctgcgccgctcggcagcgcgagaccgcgccaagacggcgttcgtg
ctcggcgatcagagcatgagctacggtgagctcgatgagcgcgtgacccgctgcgccaat
gccttgctggccgctggcttggtgcgaggtgaccgcgtgaccacgctatgcaataactcg
cttgagttcctggtggccatgttcggcatccatcgcgccggcctgatctgggtgccgatc
aacacgggcctggggctggatgacgttcgctacatcatcgaccactctgaggcgcgcttc
ctgctggtggatgccgctctgctggtgcgcccggagttgcgtgcagccatcgaggcgcag
cccggtcgcggatgggtgctggaaggcgagggggctggggctttctgcagcttcgctgca
gcgattgctgcgcagtctgccactgagtccgaggtcgaaattcatgaccgcgacgtagcc
cagatcatgtacaccagcggaaccaccggccgccctaaaggggtgatgcaaagccatttg
tcggtggtgatggcagcgatgaacaacgcgcttgagttgggggtgtggcgcgatgccgtg
aacattgccgtgctgcccctctttcattgcgcccagcacacgctgatgtgcggcgtgctg
gcgggcggcggcacggtgattgtgatgcgcgctttcgaacccgccgccatgctcgacgcc
atcgagcgtgaacgggtgaccttgctggtgggcttgccgctgatgcaccaggccatgctc
gatcatccctcgcgcccggggcgcgacctgtcgagcctgcgcatgtgcgtgtacgccatg
gcgcccatggccgagaccctgctgcgccgcctgatcgccgagttctgcccgaattactca
ttggccaccggccagaccgagatgtacccgctcaccatggccttccggcccgaagagcag
cttaaacgctttggttcctactggggcgccagtgcattgatcaacgacacggcggtgatg
gacgacgcgggccagctgctcggccccggcgaggtcggcgagatcgtgcaccgcggtccg
aacgtgatggagggctactacaaaaatcccgaagccaccgccgaggcacgcgctttcggc
tggcaccacaccggtgacctcggcatgtgggtcgatggccagatgatgttcagggaccgc
aagaaggacatgatcaagaccggcggcgaaaacgtgccgtccatcaaggtcgaggccacg
ttgctgcgccacccggcggtggccaatgtggcggcggtaggtttgccgcacccgcgctgg
gtcgaggcggtcaccgccttcgtggtgctcaagccaggggcgcaggccgacgaggccgag
ttgatcaaccactgcaaggagcatctcggtggctttgaggtgcccaaggcgatccgcatc
gtcgatgccttgccgatgacctccaccggcaagattcaaaagcatccgctgcgtgacagc
tatcgcgccctgtacgaggacattgaacgatag
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