Hydrogenophaga sp. ANAO-22: ABSY19_23535
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Entry
ABSY19_23535 CDS
T10785
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_23535
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ABSY19_23535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
XHM84474
LinkDB
All DBs
Position
complement(4862739..4863293)
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AA seq
184 aa
AA seq
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MPVGCDKPRLWPYSAPMVDTLTQEARSTLMSRVRQKDTSPEVRLRKQLHAKGLRYLLHPA
SLPGRPDLAFPRYRIAVFVHGCFWHGHNCRAGRLPSSNQAYWSEKIAANQVRDARKIAEL
RGLGWRVAVVWECETKGSNLVRTISTMVEIIRDGASPRFHTQVSEQESSWNKIPWPCRMP
TKRH
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcggatgtgataagccgcgcttgtggccgtatagtgctcctatggttgacacc
ttgacacaagaagcccgtagtacgctgatgtcgcgcgttcgtcaaaaggacacctctccc
gaggtgaggttacgcaaacaactgcacgcgaaagggctgcgctacctccttcaccctgcg
tctttgcctggccgtcccgacttagcctttcctagataccgaatcgctgtctttgttcat
ggctgcttctggcatgggcacaactgtcgggctggccgactgccgtcctccaatcaggcg
tactggtcggaaaaaatcgccgccaatcaggtacgagacgcccgcaagatcgccgaactc
cgcggattgggttggcgagtcgccgttgtttgggaatgcgaaacaaaaggctccaatctc
gttcggacaatctcgaccatggttgaaatcatccgagacggtgcttccccgagatttcac
acccaagtgtctgaacaggaatcctcatggaacaagataccctggccttgccgaatgccg
accaagcggcattag
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