Hydrogenophaga sp. ANAO-22: ABSY19_24880
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Entry
ABSY19_24880 CDS
T10785
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hyda Hydrogenophaga sp. ANAO-22
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyda03032
]
ABSY19_24880
03036 Chromosome and associated proteins [BR:
hyda03036
]
ABSY19_24880
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_24880
DNA replication proteins [BR:
hyda03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABSY19_24880
Chromosome and associated proteins [BR:
hyda03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABSY19_24880
DNA repair and recombination proteins [BR:
hyda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABSY19_24880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_HYPK
ALF
Motif
Other DBs
NCBI-ProteinID:
XHM81027
LinkDB
All DBs
Position
5132689..5132961
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVEHIAKHADISKAAATRALDSTITAIRTTLKKGGTVSLVGFGSFAVTKRPARKG
RNPRTGAEIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaacagaactcgtcgaacacattgccaagcacgccgacatctccaaggcggct
gcaacgcgtgcactggactccaccatcaccgcgatccgcaccacgctcaagaagggtggc
actgtgtcgctcgtcggttttggctctttcgccgtgaccaaacgccccgctcgcaagggc
cgcaacccccgcaccggcgctgagattaaaatcaaggccgccaaagtgccgaagttccgc
ccgggcaaggcactcaaggatgcgctgaactga
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