Hydrogenophaga sp. SNF1: SOM08_00055
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Entry
SOM08_00055 CDS
T10669
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_00055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_00055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_00055
Transporters [BR:
hydr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SOM08_00055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
WQB83740
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All DBs
Position
complement(12188..13153)
Genome browser
AA seq
321 aa
AA seq
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MRIKHSGWRVPAVLAVVLAIAPFTMPVNIANEIVVMAIFAMAANLIIGVAGLYSFGHATF
FGIGAYMGGYFLAQYGTSTLTTLVIATVAGAASAALMGAIVIRRTGFYFMMLTFAFNQMA
FYVVLTWSNVTGGEDGMGGISRTPLGLPGLGSISLDDRHVFYALCATVFIASFYVLNRVK
RSALGLVLESAKENPRRTASIGYSVYQAQITAFAISGAFAGLAGALYALLYRFVPVDTIS
LAMSGNVVFMIVIGGLSSMVGPLIGAAVFVWLQGLFSLVWARWALLFGLFIVLVVFTMPK
GLVGAFEQLRTAWAQRKGGRA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaaacactcaggctggcgcgtgcccgcggtcctcgcggttgttctggccatc
gcgcccttcaccatgccggtgaacatcgcgaacgaaatcgtggtcatggccatcttcgcc
atggccgccaatctcatcatcggagtcgccgggctgtactcgttcggccacgccaccttc
ttcggcatcggcgcctacatgggcggctacttcctcgcgcaatacggcacctccaccctc
accacgctggtgatcgccaccgtggccggtgcggcatcggccgcgctgatgggcgcgatc
gtcatccgccgcacgggcttctacttcatgatgctcactttcgccttcaaccagatggcg
ttctacgtggtgctcacctggtccaacgtgaccggaggcgaagacggcatgggtggcatc
tcgcgtaccccgctgggcctgcctggcctgggttcgatcagcctggacgatcgccatgtg
ttctacgcgctgtgcgcgacggtgttcatcgccagcttctatgtgctcaaccgcgttaag
cgcagcgcgctgggtctggtgttggagtcggccaaggaaaacccgcgccgcaccgcctcg
attggctactcggtctaccaggcgcagatcaccgcctttgccatctcgggcgccttcgcc
ggcctggcaggcgcgctctacgcgctgctctaccgcttcgtgccggtggacaccatcagc
ctggccatgtcgggcaacgtggtgttcatgatcgtgatcggcggcctgtcctccatggtc
ggtccgttgatcggcgcggcggtgttcgtctggctgcagggcctcttcagcctggtgtgg
gcgcgctgggctctgctgttcggcctcttcatcgtgctggtggtcttcaccatgcccaag
ggcctggtgggtgcgttcgagcagctgcgcaccgcgtgggcgcaacgcaagggtgggcga
gcatga
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