Hydrogenophaga sp. SNF1: SOM08_00300
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Entry
SOM08_00300 CDS
T10669
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOM08_00300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hydr03400
]
SOM08_00300
Enzymes [BR:
hydr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
SOM08_00300
DNA repair and recombination proteins [BR:
hydr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOM08_00300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
WQB83787
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All DBs
Position
complement(63419..64030)
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AA seq
203 aa
AA seq
DB search
MSQTINGPDGRPRCRWCAGAPEFLPYHDTEWGFPVDDDQRLFEKLSLEAFQSGLSWRTIL
AKRENFRAAFEGFDFHRVARFGERDVERLLADQGIVRHRGKIEAVVHNARCAQEMVKAEG
SLAAYFWRHEPGPGELAPPQSVSTSATSIALSKDLKQRGWKFVGPTTVYAFLQAMGLIND
HAEGCVVRASVDRARRAFRRPGR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccatcaacggccccgatggccgcccgcgctgccgctggtgcgcgggcgcg
cccgagttcctgccctaccacgacaccgaatggggctttccggtcgacgacgaccagcgc
ctgttcgagaagctcagcctggaggcgttccagtcgggcctgagttggcgcaccatcctc
gccaagcgcgagaactttcgcgccgccttcgagggcttcgacttccaccgcgtggcgcgc
tttggcgagcgcgacgtcgaacgcctgctggccgaccagggcatcgtgcggcaccgcggc
aagatcgaggcggtggttcacaacgcgcgctgcgcgcaggagatggtgaaggccgagggc
tcgctcgccgcctatttctggcgccacgaacccgggcccggcgaactggcgccaccccag
agtgtctccacctcggccacgtccatcgcgctgtccaaggacctgaagcagcgcggatgg
aagttcgtcggcccgaccaccgtttatgccttcctgcaggccatgggcctgatcaacgac
cacgccgaaggctgcgtggtgcgggcctcggtggaccgggcgcgccgcgccttccgtcgc
cccggccgctga
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