KEGG   Hydrogenophaga sp. SNF1: SOM08_00430
Entry
SOM08_00430       CDS       T10669                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07714  two-component system, NtrC family, response regulator AtoC
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SOM08_00430
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hydr02022]
    SOM08_00430
Two-component system [BR:hydr02022]
 NtrC family
  AtoS-AtoC (cPHB biosynthesis)
   SOM08_00430
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_23 AAA_2 Mg_chelatase HTH_AsnC-type HTH_Tnp_1 DUF3040 AAA HTH_psq RWP-RK AAA_7
Other DBs
NCBI-ProteinID: WQB83811
LinkDB
Position
90008..91342
AA seq 444 aa
MTHAPPAIHVLLIEDDAVLGGALVQRLRLEGFEVVHASDGAQALAALRRARPDFVLSDIR
LPDGSGEALYRRALPYLGRTPIVFATAFADVGQAVRLVRAGADDYLTKPFDVDALVERIR
ALVPAAGGDGPALGFGLSPATERLAGDLERLAARDVPVLLLGETGVGKEVAARQLHERSA
RAGEPFVAVNCGAVPRELMESQFFGHERGAFTGASGAHAGWFEEAGGGTLFLDEIGELDP
RLQTALLRVLQDGHFRRLGARQDQRFRGRVVAATNADLRARIAERSFREDLYYRLAVVEL
RVPPLRERPDEVLPLARGFLRQAAERQGLAPPPLTAEAEAALRAHAWPGNVRELRNRIER
AMALSEALALGAAELFPERALDEPGPAATLADARERAELAQIERALEQSGGRLAEAAASL
GVSRTTLWKRRKKLQGGDGEGGAV
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacccacgccccccccgccatccacgtgctgctgatcgaggacgacgccgtgctcggc
ggcgcgctggtgcagcgcctgcggctggagggcttcgaggtggtccacgccagcgacggc
gcgcaggccctggccgcgctgcgccgcgcgcggcccgacttcgtgctcagcgacatccgc
ctgcccgacggctcgggcgaggcgctgtaccgccgcgcgctgccctacctggggcgcacg
cccatcgtcttcgccaccgccttcgccgacgtcggccaggccgtgcgcctggtgcgcgcg
ggcgccgacgactacctcaccaagcccttcgatgtcgacgcactggtcgagcgcatccgc
gccctggtgcccgcggccggcggcgacgggccggcgctgggtttcggcctgtcgcccgcc
accgagcgcctggcgggcgacctggagcggctggccgcgcgcgacgtgccggtgctgctg
ctgggcgagaccggcgtcggcaaggaggtggcggcgcgccagctgcacgagcgctcggcg
cgcgcgggcgagcccttcgtggcggtgaactgcggcgcggtgccgcgcgaactgatggag
agccagttcttcggccacgagcgcggcgccttcaccggcgccagcggcgcgcacgccggc
tggttcgaggaggccggcggcggcaccctgttcctcgacgagatcggtgaactcgacccg
cgcctgcagaccgcgctgctgcgcgtgctgcaggacggccatttccgccgcctcggcgcg
cgccaggaccagcgcttccgcgggcgggtggtggccgccaccaacgcggacctgcgcgcg
cgcatcgccgaacgcagcttccgcgaggacctgtactaccgcctggcggtggtcgagctg
cgcgtgccgccgctgcgcgagcgcccggacgaggtgctgccgctggcgcgcggcttcctg
cgccaggccgccgagcgccagggcctggcgccgcccccgctgacggccgaggccgaggcc
gcgctgcgcgcgcacgcctggcccggcaacgtgcgcgaactgcgcaaccgcatcgagcgc
gccatggccttgagcgaggcactggccctgggcgcggccgagctgttccccgagcgagcg
ctcgacgagcccgggcccgcggccacgctggccgacgcgcgcgagcgcgccgagctggcg
cagatcgagcgcgcgctggaacagtcgggcgggcgcctggccgaggccgcggcgagcctg
ggcgtttcgcgcaccacgctgtggaagcggcgcaagaagctgcagggcggcgacggcgag
ggcggcgcggtctga

DBGET integrated database retrieval system