Hydrogenophaga sp. SNF1: SOM08_01155
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Entry
SOM08_01155 CDS
T10669
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00970
Aminoacyl-tRNA biosynthesis
hydr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOM08_01155 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hydr03029
]
SOM08_01155 (gatB)
Enzymes [BR:
hydr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
SOM08_01155 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
SOM08_01155 (gatB)
Mitochondrial biogenesis [BR:
hydr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SOM08_01155 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
WQB83952
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All DBs
Position
238221..239678
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AA seq
485 aa
AA seq
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MSKASPSLLVHGYEVVIGFETHTQLATRSKIFSRAATAFGAEPNTQASAVDLALPGTLPV
MNREAVACAIRLGLAVGAHIAERSVFARKNYFYPDLPKGYQISQYEIPVVQGGAVSFYLG
DDKKTVRLVRAHLEEDAGKSLHEDFIGQSGIDLNRAGTPLLEIVTEPDIRSSAEAVAYAK
ELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGAPLGTRREIKNLNSFKFMQQAIDYEVR
WQIEQIEDGHAIEQATVLFDPDTGETRAMRTKEDAADYRYFPDPDLPPLVVSRDWVAEVK
AAMPELPRAMAERFVQQYALPEYDATTLTQSPAMAAYFEAAAQASGQAKMASNWVMGEVS
RRLNNENRDFAKVPVSVSQLALLLERIADGTLSNKTAKQVMDQLWDSGGASVDAVIKGQG
LQQVSDSGAIEKIIDEVMAANAEMVAQFRAGKDKAFNALVGQAMKASKGKANPQQVNDLL
RQKLG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaagcccttccctgctggtgcacggctacgaggtcgtgatcggcttcgag
acgcacacccaactggccacgcggtccaagatcttcagccgcgcggccaccgccttcggc
gccgagcccaacacccaggccagcgcggtggacctcgccttgcctggcaccctgcccgtg
atgaaccgcgaggccgtggcctgcgccatccgcctgggcctggccgtgggcgcgcacatc
gccgagcgcagcgttttcgcgcgcaaaaactacttctaccccgacctgcccaagggctac
cagatcagccagtacgagattccggtggtgcagggcggcgcggtcagtttctacctgggc
gacgacaagaagaccgtgcgcctggtgcgcgcgcacctggaggaagacgccggcaagagc
ctgcacgaggacttcatcggccagagcggcatcgacctcaaccgcgcgggcacgccgctg
ctggagatcgtgaccgagcccgacatccgctccagcgccgaggccgtggcctacgcgaag
gagctgcacaagatcgtcacctggatcggcatctgcgacggcaacatgcaggagggctcg
ttccgctgcgacgccaacgtctcggtgcgcaagcccggggcgccgctgggcacgcgccgc
gagatcaagaacctgaactcgttcaagttcatgcagcaggccatcgactacgaggtgcgc
tggcagatcgaacagatcgaggacggccacgccatcgagcaggccacggtgctgttcgac
cccgacacgggcgagacgcgcgccatgcgcaccaaggaagacgcggccgactaccgctac
ttccccgaccccgacctgccgccactggtggtgtcgcgcgactgggtggccgaggtcaag
gccgccatgcccgagctgccgcgcgccatggccgagcgcttcgtgcagcagtacgccctg
cccgagtacgacgccaccacgctgacgcaaagccccgcgatggcggcctacttcgaggcc
gcggcccaggccagcggccaggccaagatggccagcaactgggtgatgggcgaggtctcg
cgccggctcaacaacgaaaacagggactttgccaaagtgccggtgagcgtttcgcaattg
gcgttgcttctcgaacgtatcgctgacggcacgctgtcaaacaaaacagccaagcaagtg
atggaccagctgtgggacagcggcggcgcttccgtggacgccgtgatcaagggtcaaggc
ctccaacaggtcagcgacagcggtgcgatcgagaagatcatcgacgaggtgatggccgcc
aacgccgagatggtggcccagttccgcgccggcaaggacaaggccttcaacgccctggtg
ggccaggccatgaaggccagcaagggcaaggccaacccgcagcaggtgaacgacctgctg
cgccagaaactgggttga
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