KEGG   Hydrogenophaga sp. SNF1: SOM08_01405
Entry
SOM08_01405       CDS       T10669                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr00521  Streptomycin biosynthesis
hydr00523  Polyketide sugar unit biosynthesis
hydr00525  Acarbose and validamycin biosynthesis
hydr00541  Biosynthesis of various nucleotide sugars
hydr01055  Biosynthesis of vancomycin group antibiotics
hydr01100  Metabolic pathways
hydr01110  Biosynthesis of secondary metabolites
hydr01250  Biosynthesis of nucleotide sugars
Module
hydr_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    SOM08_01405 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SOM08_01405 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    SOM08_01405 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SOM08_01405 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    SOM08_01405 (rfbB)
Enzymes [BR:hydr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SOM08_01405 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 3Beta_HSD adh_short
Other DBs
NCBI-ProteinID: WQB84000
LinkDB
Position
complement(291466..292530)
AA seq 354 aa
MILVTGGAGFIGSNFVLDWLAHRDEPVLNLDKLTYAGNRRNLASLDGDARHVFVRGDIGD
AALVARLLAEHRPRAVINFAAESHVDRSIHGAEDFVQTNVVGTFRLLEAVRAHWLARPEA
ERAAFRFLHVSTDEVYGSLAPEAPAFTERHPYEPNSPYSASKAASDHLVRAWHHTHGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALAGKPLPVYGDGLQVRDWLYVGDHCSAIRRVLEA
GRVGETYNVGGWNEQTNIAIVKTICALLDQLRPRADGQCYATQITHVKDRPGHDRRYAID
ARKIESELGWRPAETFDSGIRKTVRWFLDHPEWVAEVQSGAYRDWVQAQYQGAA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgatcctggtcaccggcggcgccggcttcatcggcagcaacttcgtcctggactggctc
gcacaccgcgacgagccggtgctcaacctcgacaagctcacctacgctggcaaccggcgc
aacctcgccagcctcgatggcgatgcgcgccacgtattcgtgcgcggcgacatcggcgat
gcggccctggtggcgcgcctgctggccgagcaccggccgcgcgcggtcatcaacttcgcg
gccgaaagccacgtggaccgctccatccacggcgccgaggacttcgtccagaccaacgtg
gtgggcaccttccggctgctcgaggccgtgcgcgcgcactggctcgcgcggcccgaggcc
gagcgcgcggccttccgcttcctgcacgtgagcaccgacgaggtctacggcagcctggcg
cccgaggcccccgccttcaccgagcgccacccctacgaacccaacagcccctacagcgcc
agcaaggccgccagcgaccacctggtgcgcgcctggcaccacacgcacggcctgccggtg
ctcaccaccaactgcagcaacaactacggcccgttccatttccccgagaagctgatcccg
ctgatgatcgtcaatgccctggcgggcaagccgctgcctgtgtacggcgacggcctgcag
gtgcgcgactggctctacgtcggcgaccactgcagcgccatccgccgcgtgctcgaggcc
ggccgcgtgggtgagacctacaacgtgggcggctggaacgagcagaccaacatcgccatc
gtgaagaccatctgcgccctgctcgaccagctgcgtccgcgcgcggacgggcagtgctac
gccacgcagatcacccacgtgaaagaccgccccggccacgaccggcgctacgccatcgac
gcgcgcaagatcgaatccgaactgggctggcgcccggccgagaccttcgacagcggcatc
cgcaagaccgtgcgctggttcctggaccaccccgaatgggtggccgaggtgcagagcggc
gcctaccgcgactgggtgcaggcgcagtaccagggggccgcgtga

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