Hydrogenophaga sp. SNF1: SOM08_01425
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Entry
SOM08_01425 CDS
T10669
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hydr03400
]
SOM08_01425 (radA)
DNA repair and recombination proteins [BR:
hydr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SOM08_01425 (radA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_16
AAA_22
ChlI
RecA_N
DnaB_C
Lon_C
GvpD_P-loop
AAA_30
NTPase_1
NPHP3_N
nSTAND3
SLFN-g3_helicase
nSTAND_NTPase5
AAA_5
AAA_14
AAA_24
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WQB84004
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Position
complement(294262..295641)
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AA seq
459 aa
AA seq
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MAKDKTIYTCGECGGTSPRWLGKCPHCAAWNTLVEGVAEGGGAPPKNRFAALAKTSEVMP
LSRIEARDVQRTPTGHEELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQALDSLQRAGLP
TLYVTGEESGAQVALRARRLGIEGSQVQVLAEIQLEKILATLDAEKPAIAVIDSIQTVYS
DQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTVLYFE
GDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHAQPVPGSCVMVTL
EGTRPLLVELQALVDSGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACLDQDVFVNAVGG
VRISEPAADLGVMLAITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQERLKEAAKLGFS
VAVVPKANLPKKNDKAFDGLTVHGVERIEEALDLVRRME
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacaagacgatctacacctgcggcgagtgcggcggcaccagcccgcgctgg
ctgggcaaatgcccgcattgcgccgcctggaacacgctggtggaaggcgtggccgagggc
ggcggcgcgccgccgaagaaccgcttcgcggcgctggccaagaccagcgaggtgatgccg
ctgtcgcgcatcgaggcccgggacgtgcaacgcacgcccaccggccacgaggagctggac
cgcgtgctgggcgggggcatcgtcgagggcggcgtggtgctgatcggcggcgatcccggc
atcggcaagtccaccctgctgctgcaggccctggacagcctgcagcgcgccggcctgccc
acgctctacgtgacgggcgaggagagcggcgcccaggtggcgctgcgcgcgcgccgcctg
ggcatcgagggctcgcaggtgcaggtgctggccgagatccagctggaaaaaatcctggcc
acgctggacgccgagaagcccgccatcgcggtgatcgactcgatccagaccgtctactcc
gaccagctcaccagcgcgccgggctcggtggcgcaggtgcgcgaatgcgcggcccacctc
acccgcgcggccaaggcctcgggcacggccatcgtgctggtgggccatgtcaccaaggaa
ggcgcgctggccggcccgcgcgtgctggagcacatggtggacaccgtgctctatttcgag
ggcgatacgcacagcagcttccggctgatccgcgccatcaagaaccgcttcggcgcggtc
aacgagatcggcgtgttcgccatgaccgagaagggcctcaagggcgtgagcaacccgagc
gcgatctttctctcgcagcacgcccagccggtgccgggcagttgcgtgatggtcacgctg
gagggcacgcggccgctgctggtggaactgcaggccctggtggacagcggcggccccagc
ccgcgccgcctgagcgtgggcctggagcgcgaccgcctggccatgctgctggccgtgctg
caccgccacgcgggcgtggcctgcctggaccaggacgtgttcgtcaacgccgtggggggc
gtgcgcatcagcgagcccgcggccgacctgggcgtgatgctggccatcaccagcagcctg
cgcggcaagccgctgcccaagggcttcctggccttcggcgaggtgggcctggccggcgag
gtgcggcccgcgccgcgcgggcaggagcgcctgaaagaggcggccaaactgggcttttcc
gtggcggtggtgcccaaggccaacctgcccaagaaaaacgacaaggccttcgacggcctc
accgtgcatggggtcgagcgcatcgaagaggcgctggatctggtgcgccggatggaatga
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