Hydrogenophaga sp. SNF1: SOM08_02315
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Entry
SOM08_02315 CDS
T10669
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00280
Valine, leucine and isoleucine degradation
hydr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SOM08_02315
Enzymes [BR:
hydr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
SOM08_02315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
HlyD_3
Dala_Dala_lig_C
HlyD_D23
LAL_C2
RnfC_N
GCV_H
GARS_A
NQRA_N
DUF2118
ATP-grasp_4
PTS_EIIA_1
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
WQB84164
LinkDB
All DBs
Position
477774..479795
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AA seq
673 aa
AA seq
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MFDKILIANRGEIACRVAATARRLGVKTVAVYSDADARAKHVAACDEAVHIGGSAPKDSY
LQWERILAAARATGAQAVHPGYGFLSENEAFADACAKAGLVFIGPPSSAIEAMGLKAESK
RLMEKAGVPLVPGYHGADQDPALLQREADRIGYPALIKASAGGGGKGMRVVEKSEDFAAA
LASCQREARNSFGSDAVLIEKYVQRPRHIEIQVFGDTQGHCVYLFERDCSVQRRHQKVLE
EAPAPGMTPALRQRMGEAAVAAAKAVNYVGAGTVEFIVEQPEGYDHPEAMRFYFMEMNTR
LQVEHPVTEAITGLDLVEWQLRVAAGEPLPLRQDQLRMNGHAIEARICAENPDNQFLPAT
GTLQVYRKPAHTAFERGPTRVDDGVREGDAISPFYDSMIAKLIVHGDNREQALARLDAAL
AETRIVGLATNVQFLRHVVASESFAKARLDTALIPRESAVLFQQDRVGTPTAVAAAVAQT
LLGERALEGADPFSRRDGFRSHGLTTRRFDFEVAGATLQATLTYGRGGALTLALGDVQGP
LVVEPLAPGAQGERFDLQFAGRRDTVQTWTTGETVHVFCARGATSLVEIDRLAHAGEGEG
EGGRLTAPMPGKVVSFAVKAGDAVKKGQPLAVMEAMKMEHTIAAPADGTVAELLYAPGDQ
VAEGAELLKLAAH
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagatcctgatcgccaaccgcggcgagatcgcctgccgcgtcgccgccacc
gcgcgccgcctgggcgtgaagaccgtggccgtgtactccgacgccgacgcgcgcgccaag
cacgtggccgcctgcgacgaggccgtgcacatcggcggttccgcgcccaaggacagctac
ctgcagtgggagcgcatcctcgcggccgcgcgggccacgggcgcgcaggccgtgcacccg
ggctacggtttcctcagcgagaacgaggccttcgccgatgcctgcgccaaggccggtctc
gtcttcatcggcccgccctcgtcggccatcgaggccatgggcctgaaggccgaatccaag
cgcctgatggaaaaggccggcgtgcccctggtgcccggctaccacggtgccgaccaggac
ccggccctgctgcagcgcgaggccgaccgcatcggctaccccgcgctcatcaaggccagc
gcgggcggcggcggcaagggcatgcgcgtggtggaaaaaagcgaggacttcgccgccgcc
ctggcgagctgccagcgcgaggcgcgcaacagcttcggcagcgacgccgtgctgatcgag
aagtacgtgcagcgcccgcgccacatcgagatccaggtcttcggcgacacgcagggccac
tgcgtctacctgttcgagcgcgactgctcggtgcagcggcgccaccagaaggtgctggag
gaagcgcccgcgcccggcatgacgcccgcgctgcgacagcgcatgggcgaggccgcggtg
gcggccgcgaaggcggtgaattacgtgggcgcgggcacggtggagttcatcgtcgagcag
cccgagggctacgaccaccccgaggccatgcgcttctacttcatggagatgaacacgcgc
ctgcaggtggagcacccggtgaccgaggccatcaccggtctggacctggtggagtggcag
ctgcgcgtggccgcgggcgagcccctgccgctgcgccaggaccagctgcgcatgaacggc
cacgccatcgaggcgcgcatctgcgccgagaaccccgacaaccagttcctgcccgccacc
ggcacgctgcaggtctaccgcaagccggcgcacaccgccttcgagcgtggccccacccgc
gtggacgacggcgtgcgcgagggcgacgccatcagccccttctacgattccatgatcgcc
aagctcatcgtgcacggcgacaaccgcgagcaggccctggcgcggctggacgcggccctg
gccgagacccgcatcgtcggcctggccaccaacgtgcagttcctgcgccacgtggtggcc
agcgagtccttcgcgaaggcgcggctggacacggcgctcatcccgcgcgaatcggccgtg
ctgttccagcaggaccgcgtgggcacgcccacggccgtggccgccgccgtggcccagacc
ctgctgggcgaacgcgccctggaaggcgccgaccccttctcgcgccgcgacggcttccgc
tcgcacggcctgaccacgcgccgcttcgacttcgaggtcgccggcgccacgctgcaggcc
acgctcacctacgggcgcggcggcgcgctcacgctcgcgctgggcgacgtgcagggcccg
ctggtggtcgagcccctggcacccggtgcgcagggggagcgtttcgacctgcagttcgcc
ggccgccgcgacaccgtgcagacctggaccacgggcgagaccgtgcacgtgttctgcgcg
cgcggcgccaccagcctggtcgagatcgatcggctggcccacgcgggcgaaggcgagggc
gagggcggccgcctcaccgcgcccatgcccggcaaggtcgtgtccttcgccgtgaaggcc
ggcgacgcggtgaagaagggccagccattggcggtgatggaggcgatgaagatggagcac
accatcgccgcgccggccgacggcaccgtggccgagctgctctacgcgcccggtgaccag
gtggccgagggcgcggagctgctcaagctggccgcgcactag
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