Hydrogenophaga sp. SNF1: SOM08_02450
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Entry
SOM08_02450 CDS
T10669
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hydr03009
]
SOM08_02450
Enzymes [BR:
hydr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SOM08_02450
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SOM08_02450
Ribosome biogenesis [BR:
hydr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SOM08_02450
23S rRNA modification factors
SOM08_02450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_25
S4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WQB84189
LinkDB
All DBs
Position
514199..514954
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AA seq
251 aa
AA seq
DB search
MRADQLLVERGLAASRSQAQRLIAAGVRWRAGGGWRPVAKNGDELPAGAELELLDAAEAR
YVSRGGLKLEGALAHTGVDPRGLHALDVGQSTGGFTDCLLQRGAAQVVGVDVGSGQLNAR
LRGDARVIAIEHCNARDLTAQRLREAGAEPPFDLIVGDLSFISQTLVWPALAPLLKPGGH
GLVLVKPQFELQPEDIGKGGLVKDAASYARVRERITTALQGLGLEPLDYFDSPIAGGDGN
REFFVFIRKPA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccgaccagttgctcgtcgagcgtggtctggcggcgtcgcgctcgcaggcccag
cggctgatcgcggccggcgtgcgctggcgcgccggtggcggctggcggcccgtggccaag
aacggcgacgagctgcccgccggcgccgagctggagctgctggacgcggccgaggcgcgc
tacgtctcgcgcggcggcctgaagctggagggtgcgctggcgcacaccggcgtcgatccg
cgcggcctgcacgcgctcgacgtgggccagagcaccggcggcttcaccgattgcctgctg
cagcgcggcgcggcccaggtggtgggcgtggacgtgggcagcggccagctcaacgcgcgc
ctgcgcggggatgcgcgggtgatcgccatcgagcattgcaacgcgcgcgatttgacggcc
cagcgcctgcgcgaggccggggccgagccgcctttcgacctgatcgtcggcgacctgtcc
ttcatctcgcagaccctggtgtggcccgcgctggcgccgctgctcaagcccggcggccac
ggcctggtgctcgtcaagccgcagttcgagctgcagcccgaagacatcggcaagggcggc
ctggtgaaggacgccgcctcgtacgcgcgggtgcgcgagcgcatcacgaccgcgctgcaa
ggcctgggccttgagccgctcgactatttcgacagccccatcgccggtggcgatggcaac
cgcgagttcttcgtcttcattcggaaaccggcatga
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