Hydrogenophaga sp. SNF1: SOM08_02890
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Entry
SOM08_02890 CDS
T10669
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_02890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_02890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_02890
Transporters [BR:
hydr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SOM08_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
AAA_15
AAA_29
SMC_N
MobB
AAA_22
AAA_30
MMR_HSR1
ABC_ATPase
DO-GTPase2
nSTAND1
AAA_27
NB-ARC
nSTAND3
NACHT
DUF87
RsgA_GTPase
Mg_chelatase
TsaE
Dynamin_N
ATPase_2
AAA_13
cobW
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WQB84275
LinkDB
All DBs
Position
complement(603380..604087)
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AA seq
235 aa
AA seq
DB search
MIELEKASIKYGQALALEEISVRIDFHEIVAIVGRNGAGKTTLLKALIGLMPLVAGRRLL
GEQDISGLGVEAIAKLGVALVPDTRRIFPNLSVLENLKMGALAHQPGHWTLDRVLDVFPR
LRERLNFGGDQLSGGEQQMLSIGRALLGNPRMLLLDEPTEGLAPVIVAQLVRVFSEVHRQ
GTGIVLVEQNLKVPMKLAHRQYVLDHGQVAWSGTAQELDAQRAHVEGLITTGAAA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaactcgaaaaagccagtatcaagtacggccaggccctggcgctggaagaaatc
tcagtgcggatcgattttcatgagatcgtcgccatcgtcgggcgcaacggcgcgggcaag
accaccttgctgaaagccctgatcggcctgatgccgctggtggccggccggcgcctgctg
ggtgagcaggacatttcgggcctgggcgtggaagccatcgccaagctcggcgtggcgctg
gtgccggacacgcgccgcatcttccccaacctttcggtgctggagaacctgaagatgggc
gcgctggcccaccagccggggcactggaccctcgatcgggtgctggacgtgttcccgcgg
ttgcgggagcggctgaactttggcggtgaccagctttccggcggcgagcagcagatgctg
tcgatcgggcgcgccctgctgggcaacccgcgcatgctgctgctcgacgaacccaccgag
gggctggcgccggtcatcgtagcccagctggtccgggtgttcagcgaggtccatcgccag
ggcaccggcatcgtgctggtggaacagaacctcaaggtgccgatgaagctggcccaccgt
cagtacgtgctggaccacggccaggtcgcctggtccggcacggcccaggagttggatgcg
cagcgcgcccacgtcgagggtctcatcacgacgggcgcggcggcgtga
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