Hydrogenophaga sp. SNF1: SOM08_02980
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Entry
SOM08_02980 CDS
T10669
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_02980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_02980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_02980
Transporters [BR:
hydr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SOM08_02980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_4
CobN-Mg_chel
PTS_IIB
Motif
Other DBs
NCBI-ProteinID:
WQB84292
LinkDB
All DBs
Position
622507..623700
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AA seq
397 aa
AA seq
DB search
MAAGVFGLAGTAQAQTTYNIAGLADFTGPYADVMKDMTGCRKGVLDWWSEEVGKAQGVAL
RIKEYDTRYDVAQVASLWPGIKSELDPVAILGIGGSDAAALQQRLPNDKVPQILATAGYG
FAWKSDSWVFNARATYPHEVAAFYTWLQKKSGSTAPIKVGVISSEVSPAYVDIHKGTEKF
AKDNPKILEVVETVYTEAQPTDLTQQVNRLVRKGATVLQVFNNTASVVATRRALQSLGKT
NIPIVMSAHNGLVSSGKALGGLEQMEGNFEVYGMAMSTDDPTPARAYFEQLRTKYKAQVS
YTSACIMGMSQGLIVARAVEQAIKTKGAKGVKGEDVRAALLTTPMPSERSFGVLPDLQYG
KDAPFPTEGLAVNIGTVEKGKYKLLEQNVPMPVLNKW
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcgggtgtgttcggtctggcgggcacggcccaggcgcagaccacgtacaacatc
gccggcctggccgacttcacggggccctatgccgatgtcatgaaggacatgacgggctgc
cgcaagggcgttctggactggtggagcgaagaggtgggcaaggcccagggcgtggcgctt
cgcatcaaggagtacgacacgcgctacgatgtcgcgcaggtggccagcctgtggcccggc
atcaaatcggaactcgaccccgtggcgatcctgggcatcggcggctcggacgcggcggca
ctgcagcagcgcctgcccaacgacaaggtgcctcagatcctggccaccgccggctatggc
ttcgcctggaagagcgacagctgggtgttcaacgcacgcgccacctacccgcacgaagtg
gcggccttctacacctggctgcagaaaaaatcgggttccacggcgccgatcaaggtcggc
gtgatctcgtccgaggtttccccggcctacgtggacatccacaagggcaccgagaagttc
gcgaaggacaaccccaagatcctggaggtcgtggagacggtctacaccgaagcccagccg
actgacctcacccagcaggtgaaccgcttggtccgcaagggcgcgaccgtgctccaggtc
ttcaacaacacggcctccgtggtggcgacccgccgtgcacttcagagcctgggcaagacc
aacatccccatcgtcatgtcggcccacaacggcctggtttcctcgggcaaggccctgggc
gggctggagcagatggagggcaacttcgaggtctacggcatggccatgtccacggacgat
cccactccggcacgcgcctacttcgagcagttgcgcaccaagtacaaggcgcaggtcagc
tacacctcggcctgcatcatgggcatgagccagggactgatcgtggcccgtgccgtcgag
caggcgatcaagaccaaaggtgccaagggcgtcaagggcgaagacgtgcgcgcggcgctg
ctgaccacgccgatgccgagtgaacgcagcttcggcgtgctgcccgacctccagtatggc
aaggacgcgcccttccccaccgaaggcctggccgtgaacatcggcacggtcgaaaagggc
aagtacaagctgctggagcagaacgttcccatgcccgtgctgaacaagtggtaa
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