Hydrogenophaga sp. SNF1: SOM08_03155
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Entry
SOM08_03155 CDS
T10669
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
hydr Hydrogenophaga sp. SNF1
Module
hydr_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_03155
01504 Antimicrobial resistance genes [BR:
hydr01504
]
SOM08_03155
Transporters [BR:
hydr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SOM08_03155
Antimicrobial resistance genes [BR:
hydr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
SOM08_03155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
WQB84326
LinkDB
All DBs
Position
complement(657882..659120)
Genome browser
AA seq
412 aa
AA seq
DB search
MPRPSTQPSSLGRIWLPIAALAAISAAAFAIAQQAMTAQASAPADAAPPPLPVSVATVAE
SDATLWDEFSGRLEAVERVEIRSRVAGAVLATHFREGALVAKGALLVSIDPAPYEAEVAR
AEAQASAAQARLSHASGEFARSQRLWQDKAIAQRELDDRQNALREAEANLQAARAQVQAA
RLNLGYTQVRAPVAGRIGKVDVTAGNLVAAGPGAPVLTTLVSVSPIYASFDADEQTVARA
LQGLNRGGASAHRSLERIPVRMGTAGDADTPFTGRLQLIDNQVDPRSGTVRVRAVFDNAD
GTLMPGQFARIRMAQPRSAHQLLVSERAIGTDQDKKFVLVVGDDNKAEYREVALGAPVDG
LRSVLGGLKAGERIVVNGLQRVRPGALVQPQPVPMNQARATRDAQQLAAKQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcccgtccacccaaccttcgtccctgggtcgcatctggctgcccatcgccgcg
ctggccgccatctcagcggccgcgttcgcgatcgcgcaacaggccatgaccgcgcaggcc
agcgcgcccgccgatgcggcaccgccgcccctgccggtgtcggtcgccaccgtcgccgaa
agcgacgccaccctctgggacgagttctccggccgcctggaagcggtggagcgcgtggag
atccgctcgcgcgtggcgggcgccgtgctggccacgcacttccgagagggcgcgctggtg
gccaagggcgcgctgctggtctccatcgaccccgccccctacgaggccgaggtggcgcgg
gccgaggcgcaggccagcgccgcgcaggcccgcctgagccacgccagcggcgagttcgcg
cgctcgcagcggctctggcaggacaaggccatcgcccagcgcgagctcgacgaccgccag
aacgcgctgcgcgaagccgaggccaacctgcaggccgcgcgcgcccaggtacaggccgcc
cgcctcaacctgggctacacccaggtgcgcgcgccggtggccgggcgcatcggcaaggtc
gacgtgaccgcgggcaacctcgtcgcggccggaccgggcgcgccggtgctcaccacgctg
gtgtcggtcagcccgatctacgccagcttcgacgccgacgaacagaccgtggcgcgcgcg
ctgcagggcctgaaccggggtggcgccagtgcccaccggtcgctcgaacgcatccccgtt
cggatgggcacggccggcgacgccgacacgcccttcaccggccggctgcaactcatcgac
aaccaggtcgatccgcgcagcggaacggtgcgcgtgcgcgccgtcttcgacaacgccgac
ggcacgctcatgccgggccagttcgcgcgcatccgcatggcgcagccgcgcagcgcgcac
cagctgctggtgagcgaacgcgccatcggcaccgaccaggacaagaagttcgtgttggtg
gtgggcgatgacaacaaggccgagtaccgcgaggtggcgttgggcgcgccggtggatggc
ctgcgcagcgtgctcggcggcctgaaggcgggcgagcgcatcgtcgtcaacggcctgcag
cgcgtgcggcccggcgcgctggtgcagcctcagcccgttcccatgaaccaggcgcgcgcc
acccgcgacgcgcagcaactcgcggccaagcagccctga
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