Hydrogenophaga sp. SNF1: SOM08_03220
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Entry
SOM08_03220 CDS
T10669
Name
(GenBank) tripartite tricarboxylate transporter permease
KO
K07793
putative tricarboxylic transport membrane protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_03220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_03220
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_03220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
Motif
Other DBs
NCBI-ProteinID:
WQB84339
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All DBs
Position
complement(671011..672510)
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AA seq
499 aa
AA seq
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MFDGLLLFGQSIANFSSPSTVGLALLASLVGVVMGALPGLTATMALALMTTLTLKLPPSQ
ALLILICTYVGSIYGGSRSAILLNIPGTPASAASCLDGYTLARQGLAGRAMGIATTGSVM
GTLIGMFFLATLTPVLGGLALKFGAYEFFWLALFGVIIAGTLTGDDPLKGWIAGIAGLFV
ATIGQEPQYGYERFAWGLRDLAGGIQLVPALVGAFGFAELLTSMRARQAPVTISAFDTVI
PKLRDVFQYWRTILRSGLIGTGVGIVPGVGEDVAAWSSYAAAKRASREKEKFGKGSVEGL
MAAETGDNACVPGAMIPVLTLAIPGSAPAAVLMAAMIIHGVKPGPMIMVESPQFVYDVVA
MMLFATIGILIYGLVLTKALVQVLRVPQHLIVPIIFVLCAVGSFAIAGRLFDIYVMLAFG
LIGFALRHHGYPMAPLVLGIVLGDLLEKNLRRALILSDGDLTPFFTRPIAAAVAALIFAT
IAWRVWSLVRPSRAGRAPA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacggtctgctcctgttcggccaatccatcgccaacttctcctcgccctcgacg
gtcggcctggccctgctggcctcgctggtgggcgtggtgatgggcgccctgcccggcctc
acggccaccatggcgctggcgctcatgaccacgctcacgctcaagctgccgccctcgcag
gcgctgctgatcctgatctgcacctacgtgggctccatctacggcggctcgcgttcggcc
atcctgctcaacatcccgggcacgccggcctcggccgcgtcctgcctggacggctacacc
ctggcccgccagggcctggccggccgcgccatgggcatcgccaccaccggctcggtgatg
ggcacgctgatcggcatgttcttcctcgccacgctcacgccggtgctgggcggactggcg
ctgaagttcggcgcctacgaattcttctggctcgcgctgttcggcgtcatcatcgccggc
acgctcaccggcgacgacccgctcaagggctggatcgccggcatcgccggcctgttcgtg
gccaccatcgggcaagagccgcagtacggctacgagcgcttcgcctggggcctgcgcgac
ctggccggcggcatccagctggtgcccgccctggtcggcgccttcggcttcgccgagctg
ctcaccagcatgcgcgcgcgccaggcgccggtgaccatcagcgccttcgacaccgtcatc
cccaagctgcgcgacgtcttccagtactggcgcaccatcctgcgctcgggcctcatcggc
accggcgtgggcatcgtgccgggcgtgggcgaggacgtggcggcctggtcgtcctacgcc
gccgccaagcgcgccagccgggaaaaagagaagttcggcaagggctcggtggaaggcctc
atggccgcggagaccggcgacaacgcctgcgtgccgggcgcgatgatcccggtgctcacg
ctggccattccgggctcggcgccggcggccgtgctgatggccgcgatgatcatccacggc
gtcaagccgggaccgatgatcatggtggagagcccgcagttcgtgtacgacgtggtggcc
atgatgctgttcgccaccatcggcatcctgatctacggcctggtgctcaccaaggccctg
gtgcaggtgctgcgcgtgccccagcacctgatcgtgcccatcatcttcgtgctctgcgcg
gtcggcagcttcgccatcgcgggccggctgttcgacatctacgtgatgctggccttcggc
ctgatcggcttcgccctgcgccaccatggctaccccatggcgccgctggtgctgggcatc
gtgctgggcgacctgctggagaagaacctgcgccgcgcgctgatcctctccgacggcgac
ctcacgccctttttcacccggcccatcgccgccgccgtggcggcgctgatcttcgccacc
atcgcctggcgggtgtggtccttggtccgcccctcccgcgcggggcgcgcgccggcatga
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