Hydrogenophaga sp. SNF1: SOM08_03260
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Entry
SOM08_03260 CDS
T10669
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hydr03000
]
SOM08_03260
Transcription factors [BR:
hydr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SOM08_03260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
HTH_IclR
MarR_2
TrmB
NETI
Sigma70_r4
MarR
GntR
Motif
Other DBs
NCBI-ProteinID:
WQB84347
LinkDB
All DBs
Position
complement(677484..678269)
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AA seq
261 aa
AA seq
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MELQAAVQPIHFVDSSLPLPAAPSLAATPGHSTCDTCLVRHVCLPSWLEPGTHTSLERAP
IARRRLRKGQSVFRDGERCEFIYAVRYGSFKSVASLRDGREQVMSFHLPGELFGFDGLAT
GKHPTTVRAIEDAEVCVLPYAELSEAAGESRSVLHHLTSTLSAELVRERHVAALIASTRS
EERVATFLLNLSERLHARGYSASAFQLRMTREEIGSYLGATLETVSRCLSSLARQGFVTV
RRRQIEIIDPEGLRASYADSV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaagccgctgtccagcccatccacttcgtcgattcgtcgctgcccctgccc
gcggccccgtcgctggccgccacgcccggccacagcacctgcgacacctgcctggtgcgg
cacgtctgcctgccctcgtggctggagccgggcacgcacacctcgctggaacgcgcgccg
atcgccaggcgccgcctgcgcaagggccagagcgtgttccgcgacggcgagcgctgcgag
ttcatctacgcggtgcgctacggctccttcaagtcggtggcgagcctgcgcgatgggcgc
gagcaggtcatgtccttccacctgcccggcgagctgttcggcttcgacggcctggccacc
ggcaagcaccccaccacggtgcgcgccatcgaggacgccgaggtctgcgtgttgccttat
gcggaactgagcgaggccgcgggcgagagccgctcggtgctgcaccacctcaccagcacg
ctgagcgccgagctggtgcgcgagcgccacgtggccgcgctgattgccagcacgcgctcc
gaggagcgcgtggcgaccttcctgctcaacctgtcggagcgcttgcacgcgcgcggctat
tccgcgagcgccttccagctgcgcatgacgcgcgaagagatcggcagttacctcggcgcc
acgctggagaccgtgagccgctgcctgtcctcgctggcgcgccagggcttcgtcacggtg
cgccgccgccagatcgaaatcatcgaccccgagggcctgcgcgcgagctacgccgactcg
gtctag
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