Hydrogenophaga sp. SNF1: SOM08_03610
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Entry
SOM08_03610 CDS
T10669
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02010
ABC transporters
hydr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOM08_03610
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOM08_03610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_03610
Transporters [BR:
hydr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SOM08_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_23
AAA_21
SMC_N
AAA_27
AAA_29
RsgA_GTPase
AAA_15
nSTAND1
AAA_30
AAA_19
KdpD
DUF2813
Motif
Other DBs
NCBI-ProteinID:
WQB85858
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Position
742873..743730
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AA seq
285 aa
AA seq
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MDQTGESGSAGGAAASAGAKKIGEVILDVKNISLRFGGVKALTDISFDVREHEVRAIIGP
NGAGKSSMLNCINGVYQPQEGSISFRGQTFRHMNSRQVAEMGIARTFQNLALFKGMSVID
NLMSGRNLRVRSGLLAQAFRHPFAGLKWLGSAQQEEEQHRAFVENIIDFLEIQAYRKTPV
GTLPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNLEEKQDMSRFILDVNDEFGTTIVLIE
HDMGVVMDISDRVVVLDYGKKIGDGTPEEVRTNEEVIRAYLGTSH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacgggtgagtcgggcagcgccgggggcgcggccgccagcgcgggcgccaag
aagatcggcgaggtgatcctggatgtgaagaacatcagcctgcgctttggcggggtcaag
gcactgaccgacatcagcttcgacgtgcgagagcacgaggtgcgcgccatcatcgggccc
aacggcgcgggcaagagctccatgctcaactgcatcaacggggtgtaccagccgcaggag
ggctcgatcagctttcggggccagaccttccggcacatgaacagccgccaggtggccgag
atggggatcgcgcgcaccttccagaacctggcgctgttcaagggcatgagcgtgatcgac
aacctcatgagcgggcgcaacctgcgcgtgagaagcggcttgctcgcgcaggcgtttcgc
cacccgttcgcgggcctgaagtggctgggctcggcgcagcaggaggaggagcagcaccgc
gccttcgtcgagaacatcatcgacttcctggagatccaggcctatcgcaagacgccggtg
ggcacgctgccctacgggctgcaaaagcgcgtggacctgggccgcgcgctggccatggag
ccgcaggtgctgctgctcgacgagcccatggcgggcatgaacctggaggagaagcaggac
atgagccgcttcatcctggacgtcaacgacgagttcggcaccaccatcgtgctgatcgag
cacgacatgggggtggtgatggacatctccgatcgcgtggtggtgctcgactacggcaag
aagatcggcgacggcacccccgaagaggtgcgcaccaacgaggaggtcatccgcgcctac
ctcggcacgagccactga
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