Hydrogenophaga sp. SNF1: SOM08_03635
Help
Entry
SOM08_03635 CDS
T10669
Name
(GenBank) Do family serine endopeptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr01503
Cationic antimicrobial peptide (CAMP) resistance
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_03635
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SOM08_03635
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hydr01002
]
SOM08_03635
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hydr03110
]
SOM08_03635
Enzymes [BR:
hydr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
SOM08_03635
Peptidases and inhibitors [BR:
hydr01002
]
Serine peptidases
Family S1: chymotrypsin family
SOM08_03635
Chaperones and folding catalysts [BR:
hydr03110
]
Other chaperones and cochaperones
DegP / HtrA
SOM08_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
PDZ_2
Trypsin
PDZ
Peptidase_S46
PDZ_Tricorn
Pept_S41_N_bact
DUF6288
Peptidase_S7
Motif
Other DBs
NCBI-ProteinID:
WQB84419
LinkDB
All DBs
Position
complement(748021..749535)
Genome browser
AA seq
504 aa
AA seq
DB search
MNKPLMSARYLRHRLLPLVTAMLVSGAVGGLAVGWGLSRHGTQAPLPITATTTPTAFLRT
AASVAAPASGPVDFATIAQANGAAVVNISVSGTRRVGLTGDGAPRQGANPFGFPFPFPDG
SGEAPRKDIVRGQGSGFIVDKDGLVLTNAHVVDGASHVTVKLPDRREFQARVLGTDPMTD
VAVLKIEAKNLPTVPLGTEKDLRVGDWVLAIGSPYGFENTATVGVVSAKGRSLPDESYVP
FIQTDAAINPGNSGGPLFNARGQVVGINSQIFSHTGGYQGLSFSIPIDVALKVKDQIVKS
GQAQHARLGVAAQEVNQTLAESFGLDAPRGALVAQVEPGSPADKAGLRSGDVILRVGKEP
VDRIADLPLLVGQAQPGERVDIGYWRDGREAQTSVELASASDDRAGAAKTASAAGSEHKL
GLMLRPLSEPERRASGTRQGLLIEDVTGAAELAGVQAGDLLIGINGKPVSTVAQVKAEAR
EAKQAIALQLLRDGNTLFVPLRVG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcccctgatgagcgcgcgctaccttcgccaccgcctgttgccgctggtgacg
gccatgctggtgtcgggcgccgtgggcggcctggccgtgggctggggcctctcgcgccac
ggcacccaggcccccctacccatcactgccaccaccacgccgaccgctttcctgcgcacc
gccgcctcggtggcggcgcccgccagcggcccggtcgacttcgccaccatcgcgcaggcc
aatggcgcggcggtggtcaacatctcggtcagcggcacgcgccgcgtcggcctgacgggc
gacggcgcaccgcgccagggcgccaatcccttcggctttcccttccccttccccgacgga
agcggcgaagccccgcgcaaggacatcgtgcgcggccagggctcaggcttcatcgtcgac
aaggacggcctggtgctgaccaatgcgcacgtggtggacggcgcctcgcacgtcacggtg
aagctgcccgaccggcgcgagttccaggcccgcgtgctcggcaccgaccccatgaccgac
gtggccgtgctcaagatcgaggccaagaacctgcccaccgtgccactcggcaccgaaaag
gacctgcgtgtgggcgactgggtgctggccattggctcgccctacggcttcgagaacacc
gccaccgtgggcgtggtcagcgccaagggccgctcgctgcctgacgaaagctacgtgccc
ttcatccagaccgacgcggcgatcaaccccggcaactccggcggcccgctgttcaacgcg
cgcggccaggtggtcggcatcaactcccagatcttcagccacaccggcggctaccagggc
ctgtccttctccatcccgatcgacgtcgccttgaaggtgaaggaccagatcgtgaagagc
ggccaggcgcagcacgcgcgcctgggcgtggcggcgcaggaagtgaaccagacactggcc
gaatccttcggactggacgcgccgcgcggcgcgctggtggcgcaggtggagcccggcagc
cccgccgacaaggccggcctgcgctcgggcgacgtgatcctgcgcgtgggcaaggagcca
gtggaccgcatcgcggacctgccgctgctggtgggccaggcgcagcccggcgagcgcgtg
gacatcggctactggcgcgacgggcgcgaggcccagacctcggtcgagttggcgagcgcc
agcgacgaccgcgcgggcgcggccaagaccgcttcggccgcgggcagcgagcacaagctg
ggcctcatgctgcggcccctgagcgagcccgagcggcgcgccagcggcacccgccagggc
ctgctgatcgaggacgtgacgggcgccgcggaactcgcgggcgtgcaggccggcgacctg
ctcatcggcatcaacggcaagcccgtgagcacggtggcccaggtcaaggccgaggcgcgc
gaggccaaacaggccatcgcgctgcagctcctgcgcgacggcaacacgctgttcgttccc
ctgcgcgtgggttga
DBGET
integrated database retrieval system
