Hydrogenophaga sp. SNF1: SOM08_04655
Help
Entry
SOM08_04655 CDS
T10669
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hydr02044
]
SOM08_04655
02035 Bacterial motility proteins [BR:
hydr02035
]
SOM08_04655
Secretion system [BR:
hydr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SOM08_04655
Bacterial motility proteins [BR:
hydr02035
]
Pilus system
Pilus assembly proteins
SOM08_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
WQB84616
LinkDB
All DBs
Position
complement(955307..956524)
Genome browser
AA seq
405 aa
AA seq
DB search
MATVARKSVKDFVFEWEGKDRNGKAVRGETRAQGENQVTATLRRQGIIPIKIKKRRTSSG
KRIKPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNPNPNVTRLLNDIRADVETGTSLSA
AFRKHPMYFDSLYCNLIEAGEAAGILEDLLDRLATYMEKTEALKSKIKSALMYPTAVIIV
AFVVVAVIMIFVIPSFKEVFTSFGADLPAPTLFVIAMSEFFVQYWWLIFGGLGGGLYFFL
QAWKRNEKVQRFMDRVLLKLPIFGELIEKSVVARWTRTLATMFGAGVPLVEALDSVGGAS
GNSVYAIATEKIQQEVSTGTSLTAAMTNANIFPSMVLQMCAIGEESGSIDHMLGKAADFY
EAEVDDMVAGISSLMEPIIIVVLGTVIGGIVVSMYLPIFKLGQVV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtcgcaagaaagagcgtcaaggacttcgtgttcgaatgggagggcaaagac
cgcaacggcaaggcggtgcgcggggaaacgcgcgcccagggtgaaaaccaggtgacggcc
acgctgcgccggcaaggcatcatcccgatcaagatcaagaagcgccgcacgtcttcgggc
aagcgcatcaagccgaaggacatcgcgatcttcacgcgccagttggccaccatgatgaag
gccggcgtgccactgctgcagtccttcgacatcgtgggtcgcggcaaccccaaccccaac
gtcacgcggctgctcaacgacattcgcgccgacgtggaaaccggtacctcgctgagcgcg
gccttccgcaagcacccgatgtacttcgacagcctctactgcaacctgatcgaggcgggc
gaagcggccggtatcctggaagacctgctcgaccgcctcgccacctacatggagaagacc
gaggcgctgaagtcgaagatcaagtcggccctcatgtaccccacggccgtgatcatcgtg
gccttcgtggtggtggccgtcatcatgatttttgtgatcccctccttcaaggaggtgttc
acctcgtttggcgccgacctgcccgcgcccacgctgttcgtcatcgccatgagcgagttc
ttcgtccagtactggtggctcatcttcggtggcctcggcggcggcctctacttcttcctg
caggcctggaagcgcaacgaaaaggtccagcgattcatggaccgcgtgctgctcaagctg
cccatcttcggcgagctgatcgagaaatcggtggtggcgcgctggacacgcacgctggcc
accatgttcggcgcgggcgtgccgctggtggaagcgctcgattccgtgggtggcgcctcg
ggcaactcggtctatgccatcgccaccgaaaagatccagcaggaggtgtcgaccggcacc
agcctcacggccgcgatgaccaacgcgaacatctttccctcgatggtgctgcagatgtgc
gcgatcggcgaagaatcaggctccatcgaccacatgctgggcaaggccgccgacttctac
gaggccgaggtcgacgacatggtggccggcatctccagcctgatggagccgatcatcatc
gtcgtactcggcacagtgatcggcggcatcgtcgtctcgatgtacctgcccatcttcaag
ctcggccaggtggtctga
DBGET
integrated database retrieval system
