Hydrogenophaga sp. SNF1: SOM08_05050
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Entry
SOM08_05050 CDS
T10669
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOM08_05050 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hydr01007
]
SOM08_05050 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hydr03016
]
SOM08_05050 (serS)
Enzymes [BR:
hydr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SOM08_05050 (serS)
Amino acid related enzymes [BR:
hydr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SOM08_05050 (serS)
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOM08_05050 (serS)
Prokaryotic type
SOM08_05050 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TetR_C_38
DUF4140
DivIC
Motif
Other DBs
NCBI-ProteinID:
WQB84688
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All DBs
Position
1036421..1037767
Genome browser
AA seq
448 aa
AA seq
DB search
MLDIVQLRKDLPATVARLETRKQPQPYLDVAAYQALEGERKTLQTRTEELQAQRNSVSKQ
IGMLKGKGQHAEADAAMAQVGAIKAELEAGAARLDLIQAELQALLMAVPNLPHESVPVGG
DESGNVEVRRWSPGGKGPRAFDFPVRDHVDLGAPLGLDFETGALLSGSRFSFLRGPIARL
HRALAQFMLDVQTLEHGYTECYTPYIVNREALEGTGQLPKFKEDMFWVYRGKGPGDAGAG
GGDDAATEQYLISTSEISLTNTVRERVLAESELPIKLTAHSPCFRSEAGSAGRDTRGMIR
QHQFDKVEMVQITHPDQSYEALEQMVGHAEAILQKLELPYRVVALCTGDMGFAAAKTYDL
EVWVPAQDTYREISSCSNCEAFQARRMQARFKNAQGKNELVHTLNGSGLAVGRALVAVLE
NHQNADGSISVPAALRPYLGGLERLAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcgttcaactgcgcaaggacctgcccgccaccgtggcccggctcgagacg
cgcaagcagccccagccttatctcgacgtcgcggcctaccaggccctcgaaggcgagcgc
aagaccctgcagacccgcaccgaggagttgcaggcccagcgcaacagcgtgtccaagcag
atcggcatgctcaagggcaagggccagcacgccgaggccgatgcggccatggcccaggtc
ggcgccatcaaggccgagctggaggccggtgccgcccggctggacctgatccaggccgag
ttgcaggccctgctgatggccgtgcccaacctgccgcacgagagcgtgccggtgggcggc
gacgagtcgggcaacgtggaggtgcgtcgctggagccctggcggcaaggggccgcgcgcg
ttcgacttcccggtgcgcgaccacgtcgacctgggcgcaccgctggggctggacttcgag
accggtgccctgctctcgggctcgcgcttcagcttcctgcgtggcccgatcgcgcggctg
caccgcgcgctcgcccagttcatgctggacgtgcagaccctggagcacggctacaccgag
tgctacacgccctacatcgtcaaccgcgaggcgctggagggcacgggccagttgcccaaa
ttcaaggaagacatgttctgggtctaccgggggaagggccccggtgatgccggcgcgggc
ggtggcgacgacgccgccaccgagcagtacctcatctccacctcggaaatttctctcacc
aacaccgtgcgcgagcgcgtgctggccgagtcggagctgcccatcaagctgaccgcgcac
agcccctgcttccgctcggaggccggcagcgcgggccgcgacacgcgcggcatgatccgc
cagcaccagttcgacaaggtcgagatggtgcagatcacccaccccgaccagagctacgag
gcgctggagcagatggtgggccacgccgaggccatcctgcagaagctggaactgccctac
cgcgtggtcgcgctgtgcacgggcgacatgggcttcgctgcggccaagacctacgacctg
gaggtctgggtgccggcgcaggacacctaccgcgagatctcgagctgctccaactgcgag
gccttccaggcgcggcgcatgcaggcgcgcttcaagaacgcgcagggcaagaacgaactg
gtgcacacgctcaacggctctggcctggcggtgggccgcgcgctggtggcggtgctggag
aaccaccagaacgccgacggcagcatcagcgtgccggccgcgctgcggccctacctcggc
gggctggagcggctggcggcggaatag
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