Hydrogenophaga sp. SNF1: SOM08_05430
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Entry
SOM08_05430 CDS
T10669
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hydr03036
]
SOM08_05430
03400 DNA repair and recombination proteins [BR:
hydr03400
]
SOM08_05430
Chromosome and associated proteins [BR:
hydr03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
SOM08_05430
DNA repair and recombination proteins [BR:
hydr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SOM08_05430
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GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
WQB84759
LinkDB
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Position
1121103..1121411
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AA seq
102 aa
AA seq
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MATYSELMAQAQSLMAQAEQARKDELSNVIADIKAKMKQYGISVADLGGASAGGRKAAKS
KSGAAPKYRGPNGELWAGGPGRKPQWVRDALAAGKDLDAYKI
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtattccgaactgatggcccaggcgcaatcgctgatggcgcaggccgagcag
gcccgcaaggacgaactgtccaatgtgatcgccgacatcaaggccaagatgaagcagtac
ggcatcagcgtggccgatctgggcggcgccagcgcgggcggccgcaaggcggccaagtcc
aagtcgggcgcggcgcccaagtaccgtggccccaacggcgaactctgggccggcggcccg
ggccgcaagccgcagtgggtgcgcgatgcgctcgccgctggcaaggatctggacgcgtac
aagatctga
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