KEGG   Hydrogenophaga sp. SNF1: SOM08_05445
Entry
SOM08_05445       CDS       T10669                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
hydr  Hydrogenophaga sp. SNF1
Pathway
hydr00061  Fatty acid biosynthesis
hydr00071  Fatty acid degradation
hydr01100  Metabolic pathways
hydr01212  Fatty acid metabolism
hydr02024  Quorum sensing
hydr04146  Peroxisome
Module
hydr_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SOM08_05445
   00071 Fatty acid degradation
    SOM08_05445
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SOM08_05445
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SOM08_05445
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:hydr01004]
    SOM08_05445
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hydr04147]
    SOM08_05445
Enzymes [BR:hydr01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SOM08_05445
Lipid biosynthesis proteins [BR:hydr01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SOM08_05445
Exosome [BR:hydr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SOM08_05445
  Exosomal proteins of breast cancer cells
   SOM08_05445
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: WQB84762
LinkDB
Position
complement(1122976..1124667)
AA seq 563 aa
MSEKIAPALLALQRLYDWETKAPARVALTQPMGGGVVHDFTWAQVADQVRRMAAHLQAQG
WEPGSKVAILSKNCAWWMMSDLAIWMAGHVSVPLYPTLAPETIRQILTHSESKALFVGKL
DGWDGMKPGVPAGLPCISYPLSPVDAIQDYDGWDAICARTGPLQGQPVRAEDDLATLIYT
SGTTGLPKGVMHSFGNFAWAIDRGLQRIPLTAKDRMLSYLPLAHVVERMLVEHGWLRTGM
HVFFAESLDTFAADLQRARPTVFFSVPRLWVKFQQGIHAKMPPAKLERLLRIPLLGGIVR
RKIQKALGLDQCQFAAGGAAPMPPALLQWYAQLGIPINEGYGMTENLALSHITEPGKNQR
GTVGPPYPGVEQRLDPQTGEIQMRSQALMQGYYKEPEKSREAFTEDGWLRTGDKGSIDAA
GLLSITGRVKDLFKTGKGKYVAPAPIEDKLVMHEAVEACVVTGANLGQPLGICMLSPEAS
AKAKNADERAALERSLAEHRAAINATLDPHEQMQCLVVVSTPWTVDNDMITPTFKVKRNR
IEDVYARHYEKWEVTGKPVIWAD
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagcgagaagatcgcgcccgcgctgctggccctgcaacgcctgtacgactgggagacc
aaggcgcccgcgcgcgtggccctcacgcagcccatgggcggcggcgtggtgcacgacttc
acctgggcccaggtggccgaccaggtgcgccgcatggccgcgcacctgcaggcccagggc
tgggaacccggcagcaaggtcgccatcctgtccaagaactgcgcctggtggatgatgagc
gacctggcgatctggatggccgggcacgtgtcggtgccgctgtaccccacgctcgcgccc
gagaccatccgccagatcctcacgcacagcgagtccaaggccctattcgtgggcaagctc
gacggctgggacggcatgaagccgggcgtgcccgccggcctgccctgcatcagctacccg
ctgtcgccggtggatgcgatccaggactacgacggctgggacgccatctgcgcgcgcacc
gggccgctccagggccagcccgtgcgtgccgaggacgatctcgccacgctgatctacacc
tcgggcaccaccggcctgcccaagggcgtgatgcacagcttcggcaacttcgcctgggcc
atcgaccgcggcctgcagcgcatcccgctcacggccaaggaccgcatgctgagctacctg
ccgctggcccatgtggtggagcgcatgctggtcgagcacggctggctgcgcacgggcatg
cacgtgttcttcgccgaatcgctggacaccttcgcggccgacctgcagcgcgcgcggccc
acggtgttcttctcggtcccgcgtctgtgggtcaagttccagcagggcatccacgccaag
atgccgccggccaagctggagcggctgctgcgcattcccctgctgggcggcatcgtgcgc
cgcaagatccagaaggccctgggcctggaccagtgccagttcgccgccggcggcgccgcg
cccatgccgcccgcgctgctgcagtggtacgcccagttgggcatccccatcaacgagggc
tacggcatgaccgaaaacctcgcgctctcgcacatcaccgaaccgggcaagaaccagcgt
ggcacggtgggccccccctaccccggcgtggagcagcgcctggacccgcagaccggcgaa
atccagatgcgcagccaggcgctgatgcagggctactacaaggaacccgagaagagccgc
gaggccttcaccgaggacggctggctgcggaccggcgacaagggcagcatcgacgccgcc
ggcctgctgagcatcaccggccgcgtgaaggacctgttcaagaccggcaagggcaagtac
gtggcgcccgcgcccatcgaggacaagctggtcatgcacgaggcggtggaggcctgcgtg
gtgacgggcgccaacctgggccagccgctgggcatctgcatgctcagccccgaggcgtcc
gcgaaggcgaagaacgccgacgaacgcgccgcgctggagcgctcgctggccgagcaccgg
gcggccatcaacgccaccctcgacccgcacgagcagatgcaatgcctggtcgtggtgtcc
acgccctggacggtggacaacgacatgatcacgccgaccttcaaggtcaagcgcaaccgc
atcgaggacgtgtacgcccgccactacgagaagtgggaggtcaccggcaagccggtgatc
tgggccgactga

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