Hydrogenophaga sp. SNF1: SOM08_06460
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Entry
SOM08_06460 CDS
T10669
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hydr03000
]
SOM08_06460
Transcription factors [BR:
hydr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOM08_06460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_23
Cro
Motif
Other DBs
NCBI-ProteinID:
WQB84953
LinkDB
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Position
complement(1317779..1318705)
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AA seq
308 aa
AA seq
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MVRLGEDISSRKLEVLVAYLEHRTLSAAADALNTSAVSVHRALHSLEDSVRCSLFRHEGR
VLVPTEAAHTLAGVAQDVLGRLERGIEATRAAAGYSSDRLKIGSLYSLTSHLLPELIKAM
NQRRPNVQCELVLGKSRNELLPRLRQGLVDSVFAEISPADTDLVCLPLFEDEPCFAAPLS
SPLAALDAITLADHAGEKTVTLAEGPFSAERLAERFPDFRPTVVMEVQDIFTQMNLVANG
MACAVVPGRIRAMYQHLVRFVPLAEGQGARQTIGLCFMKARERDPNLLALSSVARLFVRG
RERDAARA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtctgggtgaagacatttcctcgcgcaagctcgaggtgctggtggcctacctg
gaacatcgaacgctcagcgcggccgccgatgcgctcaacaccagcgcggtgagcgtgcac
cgcgcgctgcactcgctggaggacagcgtgcgctgctcgctgtttcgccacgagggtcgc
gtgctggtgcccaccgaagccgcccacacgctggccggcgtggcccaggacgtgctgggg
cggctggagcgcggcatcgaagccacgcgcgcggccgcgggctactcgtcggaccggctc
aagatcggttcgctgtactcactcaccagccacctgctgcccgaactcatcaaggcgatg
aaccaacgccggccgaacgtgcagtgcgaactcgtcctgggcaaatcgcgcaacgaactg
ctgccgcgcctgcgccaggggctggtcgactcggtgtttgccgagatcagcccggccgac
acggacctggtctgcctgccgctgttcgaggacgagccctgcttcgccgcgcccctgtcc
tcgcccctggcggcgctggacgcgatcacgctggccgatcacgccggcgaaaaaaccgtc
accctggccgagggaccgttctcggccgagcgcctggccgagcgcttcccggacttccgg
cccacggtggtgatggaggtgcaggacatcttcacgcagatgaacctggtggccaacggc
atggcctgcgccgtggtgccggggcgcatccgcgcgatgtaccagcacctggtgcgcttc
gttcccctggccgagggtcagggcgcgcgccagaccatcgggctgtgcttcatgaaggcg
cgcgaacgcgacccgaacctgctggcgctgtcctcggtcgcccggctgttcgtgcgcggg
cgtgaacgcgacgccgcgcgcgcctga
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