Hydrogenophaga sp. SNF1: SOM08_06930
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Entry
SOM08_06930 CDS
T10669
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_06930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_06930
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
WQB85044
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All DBs
Position
1423441..1424520
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AA seq
359 aa
AA seq
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MDRRSLIRHAGVAGVLAAGIAPAVHAQATIRWRLTSSFPKALDTIHGAADVFASSIKAMS
GGKFEVSVHAPGELVPALGVVDAVQAGTVEMGHTAPYYFFGKDPTFAMATAIPFGLNSRQ
LTAWMYDGNGLKLFREFYDQYNIVNFPGGNTGAQMGGWYRKEIKTAADIKGLKMRIGGFA
GQVLTRMGGVPQNIPGGEIYQALEKGTIDATEWVGPYDDEKLGFQKVAKNYYYPGWWEGG
AQLEFYVNKAAYNGLSAEHKAMVENAASHAHTVMQARYDARNPAALKRLVAGGAKVLAFP
KPIMDLAFKESMGLYEELNASNPHWKKIYADYSNFRRDQNLWFRFTEAQFDRYMQSAKL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcgctctctcatccggcatgccggagtcgccggcgtgctcgctgccggcatc
gcgcctgcggtacacgcccaggccaccatccgctggcgcctgacatccagcttccccaag
gcactggacaccatccacggcgccgccgacgtcttcgccagcagcatcaaggcgatgtcg
ggcggcaagttcgaggtcagcgtgcacgcgccgggcgaactggtgccagcgctcggcgtc
gtcgacgcggtgcaggccggcacggtggagatgggccacacggcgccctactacttcttc
ggcaaggacccgaccttcgccatggccaccgccattcctttcggcctgaacagccgccag
ctcacggcctggatgtacgacggcaacggcctcaagctgttccgcgagttctacgaccag
tacaacatcgtcaacttccccggcggcaacaccggcgcgcaaatgggcggctggtaccgc
aaggaaatcaagaccgcggccgacatcaagggcctgaagatgcgcatcggcggcttcgcc
ggccaggtgctcacgcgcatgggcggtgtgccgcagaacatccccggcggcgagatctac
caggcgctggagaagggcaccatcgacgccaccgaatgggtgggcccgtacgacgacgag
aagctgggctttcagaaggtcgccaagaactactactacccgggctggtgggagggtggc
gcgcagctcgagttctacgtcaacaaggccgcctacaacggcctgtcggccgagcacaag
gccatggtcgagaacgccgcctcgcacgcccacacggtgatgcaggcccgctacgacgcg
cgcaaccccgcggccctcaagcgcctggtggccggcggcgcgaaggtgctggccttcccc
aagccgatcatggacctggccttcaaggagtccatgggcctgtacgaggagctcaacgcc
tccaacccccactggaagaagatctacgccgactattcgaacttccgccgggaccagaac
ctgtggttccgcttcaccgaggcccagttcgaccgctacatgcaatcggctaagctctga
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