Hydrogenophaga sp. SNF1: SOM08_07000
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Entry
SOM08_07000 CDS
T10669
Name
(GenBank) crosslink repair DNA glycosylase YcaQ family protein
KO
K09927
uncharacterized protein
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
SOM08_07000
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Ortholog
Paralog
GFIT
Motif
Pfam:
AlkZ-like
DUF6356
Motif
Other DBs
NCBI-ProteinID:
WQB85056
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Position
1438587..1439717
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AA seq
376 aa
AA seq
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MATPLTLDALRRHAIARSLFRPLALPAAVRRLGFVQADPMRAPARAQDLILFQRVRDYRA
GDLERRYERLGLEEDAFVNYGFVPRGMLALLHPRTPRQAWDADTTQRARAVLDFVRERGL
AHPREVGQAFAHHGRVAGYWGGDLNASTRLLDHMHYHGWLRVRRREGGTRLYEAMEHAAQ
DDSPAARRARAEALVDAIVNLYAPLPASSLGYLVTLLRYGAPQLAAEARAVAQAARTRYG
HAVVDGTTWFWPADENPASRRHQPDGTGLRLLAPFDPVVWDRRRFEMLWGWAYRFEAYLP
APRRTMGHYALPLLWGEQVLGWANLRLERGRLVRELGFVSGRAPRDAAFKRALDEELARF
EAFLSGYGRAVGGPQE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcccctgaccctcgacgcgctgcgccgccacgcgatcgcgcgcagcctgttc
aggccgctggcgctgccggccgcggtgcgccggctgggcttcgtgcaggccgaccccatg
cgcgcgccggcgcgcgcgcaggacctcatcctgttccagcgcgtgcgcgactaccgcgcg
ggcgacctggagcgccgctacgagcgcctgggcctggaggaagacgccttcgtcaactac
ggcttcgtgccgcgcggcatgctggccctgctgcacccgcgcacgccgcgccaggcctgg
gatgccgacaccacccagcgcgcgcgggccgtgctcgatttcgtgcgcgagcgcggcctg
gcccacccgcgcgaggtgggccaggccttcgcccaccacggtcgcgtggccggttactgg
ggtggcgacctgaacgccagcacgcgcctgctggaccacatgcactaccacggctggctg
cgcgtgcgccggcgcgaaggcggcacgcggctgtacgaggccatggagcacgccgcgcag
gacgacagtcccgccgcgcgccgggcgcgcgccgaggcgctggtcgacgccatcgtgaac
ctctacgcgccgctgcccgcatccagcctcggctacctggtcacgctgctgcgctacggc
gcgccgcagctcgcggccgaggcccgcgccgtcgcccaggccgcgcgcacgcgctacggc
cacgcggtggtcgatggcaccacctggttctggccggccgacgaaaaccccgcctcgcgc
cgccaccagccggacgggacaggcctgcggctgctcgctcccttcgatccggtggtgtgg
gaccgccgccgcttcgagatgctgtggggctgggcctaccgcttcgaggcctacctgccg
gcgccccggcgcaccatgggccactacgcgctgccgctgctgtggggggaacaggtgctg
ggctgggccaatctgcgcctggaacgcgggcgcctggtgcgcgagctgggtttcgtgtcg
ggccgggcgccgcgcgatgccgccttcaagcgcgcgctcgacgaggaactggcgcgcttc
gaggcatttctgtcgggttatgggcgcgccgtgggcgggccccaggagtga
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