Hydrogenophaga sp. SNF1: SOM08_07120
Help
Entry
SOM08_07120 CDS
T10669
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_07120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_07120
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
WQB85080
LinkDB
All DBs
Position
complement(1469427..1470431)
Genome browser
AA seq
334 aa
AA seq
DB search
MKLIPLLATAALLSAGAASAQTVFTASSWVPPTHTLSMAQKSWCDLLEKESAGRMKCNIL
PKSVAAAPGTFDAVRDGLADISYTVDGYTPGRFVFTQLAEFPFLGDSALATSVAYQHLYA
KHFAPLGEHRGVKVLAVFTHGPGIIFNSKQPVKTLDDATKLKFRIGGGNINELSKLMGFN
TTLKPAPDSFELLSTGVMDGTFFPDESIASFKLNMIKHATTFPGGLYNTSFVFMMNPAKY
NALSAQDKAVVDKISGEVATRIFGEGWDKVDAASRELQKTQGVARIQADDSFIKAVAAKQ
AELEDKWAAAAAAKGLKDPKAVLAEFRAEIKKVK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgattcccctcctggccaccgccgccctgctgagcgccggtgcggcctcggcg
cagaccgtgttcaccgcctcatcgtgggtcccccccacgcacacgctgagcatggcgcag
aaatcgtggtgcgacctgctggagaaggaaagcgcgggtcgcatgaagtgcaacatcctg
cccaagtccgtggcggcggcgcccggcaccttcgacgccgtgcgcgacggcctggccgac
atctcctacacggtggacggctacacgccgggccgcttcgttttcacgcagctggccgag
ttccccttcctgggcgacagcgcgctggccacctcggtggcctaccagcacctctacgcc
aagcacttcgcgccgctgggcgagcaccgcggggtgaaggtgctggccgtgttcacgcac
ggccccggcatcatcttcaacagcaagcagccggtgaagacgctggacgacgccaccaag
ctcaagttccgcatcggcggtggcaacatcaacgagctgtccaagctcatgggcttcaac
accacgctcaagcccgcgcccgactccttcgagctgctgtccaccggcgtgatggacggc
accttcttccccgatgaatcgatcgcctcgttcaagctgaacatgatcaagcacgccacc
accttccctggtggcctctacaacaccagcttcgtgttcatgatgaacccggccaaatac
aacgccctgtccgcgcaggacaaggccgtggtcgacaagatctcgggcgaggtcgccacg
cgcatcttcggcgaaggctgggacaaggtcgacgccgccagccgcgagctgcagaagacc
cagggcgtggcgcgcatccaggccgacgactccttcatcaaggccgtcgcggccaagcag
gccgagctggaggacaaatgggccgccgccgccgcggccaagggcctgaaggaccccaag
gccgtgctggccgagttccgcgccgagatcaagaaggtcaagtaa
DBGET
integrated database retrieval system
