Hydrogenophaga sp. SNF1: SOM08_07180
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Entry
SOM08_07180 CDS
T10669
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOM08_07180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_07180
Transporters [BR:
hydr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOM08_07180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DctM
CFAP410_C
CitMHS
Motif
Other DBs
NCBI-ProteinID:
WQB85092
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All DBs
Position
1482908..1484185
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AA seq
425 aa
AA seq
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MTIALFLLVLFAAMTVGVPIAFALMLTALALMVHLDFFDAQLLAQNVQAGFDSFPLLAVP
FFILAGELMNAGGLSRRIIDLARAFVGHIPGGLGYVAIAASVMLASMSGSAIADTAALAT
LLLPMMRQQRYPEGTSAGLIASGGIIAPIIPPSMPMVIYGVTTNTSISKLFLAGIVPGLL
MAVSLVLVWRRISRKEQLPVADKTSWAQRRAVLSSSIWALFMPVIIIGGLRLGLFTPTEA
AVVAAVYALIVAMFVYRELSVAGLYRVFVDAARTTGVVMFLCGAATAASYMITLADLPNE
LAGVMGPLLQNPYLFMVVVAVFLLAVGMVMDLTPTILILAPVLAPLAAKAGIDPVYFGFV
FIFIGCLGLLTPPVGTVLNVVAGVGGLRMEPVIRGVMPFLLVYVAMLALLIGFPAIVLQP
LKWMF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcgctcttcctgctggtgctgttcgccgccatgacggtgggcgtgccgatc
gccttcgcgctcatgctcaccgcgctggcgctgatggtgcatctcgacttcttcgacgcc
cagctgctggcgcagaacgtgcaggccggcttcgacagcttccccctgctggccgtgccc
ttcttcatcctggccggcgagctcatgaacgccggtggcctgagccggcgcatcatcgac
ctggcgcgcgccttcgtgggccacatcccgggcggcctgggctacgtggcgatcgcggcc
tcggtcatgctggcctcgatgagcggctcggccatcgccgacaccgccgcgctggccacg
ctgctgctgcccatgatgcgccagcagcgctaccccgagggcaccagcgccggcctcatc
gcctcgggcggcatcatcgcgcccatcatcccgccgtccatgcccatggtgatctacggc
gtgaccaccaacacctcgatcagcaagctcttcctcgcgggcatcgtgcccggcctgctg
atggcggtgagcctggtcctggtgtggcgccgcatctcgcgcaaggaacagctgcccgtg
gccgacaagaccagctgggcgcagcgccgcgcggtgctcagctccagcatctgggcgctg
ttcatgccggtcatcatcatcggcgggctccggctgggcctgttcacacccaccgaggcg
gcggtggtggcggcggtgtacgcgctgatcgtggccatgttcgtgtaccgcgagctcagc
gtggcgggcctgtaccgcgtgttcgtggacgccgcccgcaccaccggcgtggtgatgttc
ctgtgcggcgccgccacggcggccagctacatgatcaccctggccgacctgcccaacgaa
ctggccggcgtgatgggccccctgctgcagaacccctacctcttcatggtggtggtggcc
gtgttcctgctcgccgtgggcatggtgatggacctcacgcccaccatcctcatcctggcg
ccggtgctcgcgccgctcgccgccaaggccggcatcgacccggtgtacttcggcttcgtc
tttatcttcatcggctgcctgggcctgctcacgccgcccgtgggcacggtgctcaacgtg
gtggccggcgtgggcggcctgcgcatggagccggtgatccgcggggtgatgcccttcctg
ctggtctatgtcgccatgctggccttgctgatcggcttccccgcgatcgtgttgcagccg
ctcaagtggatgttctga
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