Hydrogenophaga sp. SNF1: SOM08_07500
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Entry
SOM08_07500 CDS
T10669
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOM08_07500 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hydr01007
]
SOM08_07500 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hydr03016
]
SOM08_07500 (lysS)
Enzymes [BR:
hydr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SOM08_07500 (lysS)
Amino acid related enzymes [BR:
hydr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SOM08_07500 (lysS)
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SOM08_07500 (lysS)
Prokaryotic type
Other AARSs
SOM08_07500 (lysS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WQB85156
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All DBs
Position
1551959..1553515
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AA seq
518 aa
AA seq
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MSQANTPDTAAPVAQDENQLIAERREKLKALREGQKRGEGVAFPNDHKPTDNAAALFAAH
GESSKEALEATPVRASVAGRMMLKRVMGKASFATLQDASLGPSGGRIQIYLNNDSVGEAQ
HNAFKHWDLGDIVAAEGTLFRTRTGELTIHADKIRLLTKSLRPLPDKFHGVADQEIKYRQ
RYVDLMTDEGARRRFVTRSQAVTALRQFMVSHGFLEVETPMLHPIPGGANAKPFVTHHNA
LDQEMFLRIAPELYLKRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRD
LMDFSEQLIRHVVRTVRGEGEVSYQGRVVDIDSPFERLTIRDAIVKYTDAGANVDSADWL
LGQLRKLGLNEEKDQLSKRSLASLQVLFFEEKVESELWNPTFIMEHPTEISPLARANDER
PEVTERFELYITGREFGNAFSELNDAEDQAARFQAQVDAKDGGDDEAMHFDADYIRALEY
GMPPAGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagccaacacccccgacaccgccgcccccgttgcgcaagacgagaaccagctg
atcgccgaacggcgcgagaagctcaaggccctgcgcgagggccagaagcggggcgagggg
gtggccttcccgaacgaccacaagcccacggacaacgccgccgcactgttcgccgcccat
ggcgagagcagcaaggaagcgctggaggccacgccggtgcgcgccagcgtggcggggcgc
atgatgctcaagcgcgtgatgggcaaggccagcttcgccacgctgcaggacgcctcgctg
ggccccagcggaggtcgcatccagatctacctgaacaacgacagcgtgggcgaggcccag
cacaacgccttcaagcactgggacctgggcgacatcgtggccgccgagggcacgctgttt
cgcacccgcaccggcgagctgaccattcacgccgacaagatccgcctgctcaccaagagc
ctgcgcccgctgcccgacaagttccacggcgtggccgaccaggagatcaagtaccgccag
cgctacgtggacctgatgaccgacgagggcgcgcgccgccgtttcgtcacgcgcagccag
gccgtcacggcactgcgccagttcatggtgtcgcacggcttcctggaggtcgagacgccc
atgctgcaccccatccccggcggtgccaatgccaagcccttcgtcacgcaccacaacgcg
ctcgaccaggaaatgttcctgcgcatcgcgcccgagctgtacctcaagcggctgctggtg
gggggcttcgagcgcgtgttcgagatcaaccgcaacttccgcaacgaaggcatctcggtg
cggcacaaccccgagttcaccatgatggagttctacgcggcgtactggaactaccgcgac
ctcatggacttttcggaacagctcatccgccatgtggtgcgcacggtgcgcggcgagggc
gaggtgagctaccagggccgcgtggtcgacatcgactcgcccttcgagcgcctgaccatc
cgcgacgccatcgtcaagtacaccgacgccggcgcgaacgtggacagcgccgactggctg
ctcggccagttgcgcaagctcggcctgaacgaggaaaaggaccagctctccaagcgcagc
ctggcctcgctgcaggtgctgttcttcgaggagaaggtggagagcgagctctggaacccc
accttcatcatggagcacccgaccgagatctcgccgctggcgcgcgccaacgacgagcgg
cccgaggtgaccgagcgcttcgagctctacatcaccggccgcgaattcggcaacgccttc
tccgagctgaacgacgccgaggaccaggccgcgcgtttccaggcccaggtggacgccaag
gacggcggcgacgacgaggccatgcacttcgacgccgactacatccgcgcgctggagtac
ggcatgccgcccgccggcggctgcggcatcggcatcgatcgcctgatgatgctgctgacc
gacagccccagcatccgcgacgtgatcctgttccccgcgctgcgccgcgagagctga
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