Hydrogenophaga sp. SNF1: SOM08_08210
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Entry
SOM08_08210 CDS
T10669
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
SOM08_08210 (lapB)
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GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_14
TPR_7
TPR_19
TPR_12
TPR_2
TPR_11
TPR_17
TPR_16
TPR_1
NatA_aux_su
TPR_CcmH_CycH
TPR_Slam
TPR_9
Zn_ribbon_8
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
WQB85296
LinkDB
All DBs
Position
complement(1695100..1696245)
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AA seq
381 aa
AA seq
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MDFDLTWLLWGLPVAFALGWVASRLDLRQWRIEGRQAPKAYFRGLNHLLNEQQDQAIDAF
IEAVQGDPDTTELHFALGNLFRRRGDYDRAVRVHEHLLSRADLNRKERDRAQHALALDFL
KAGLLDRAESALSKLEGTAFENEARLALLGIYERSRDWAQARAIAEKLDSAEHGAFTTRV
AHYLCELAELAHREGQAERVRALLDEAVRRAPTLARGWMARSALRNQQGDAAGALDDLLA
LAEQAPAALPLAARAMAELAQQTGRTDPVLRTLGNAQARAPSIDVTEALARLAPQPEGAR
GMYLRHLEAEPSLVIASQWLAGETLSNPQAQSSVQRALEHASGPLRRYRCAACGFEARQH
FWQCPGCQAWDSYPARRVEEL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacctgacctggctgctctggggcctgccggtggctttcgcgctgggctgg
gtggcctcgcgcctggacctgcgccagtggcgcatcgaaggccggcaggcgcccaaggcc
tacttccgcggcctgaaccacctgctcaatgaacagcaggaccaggccatcgacgccttc
atcgaggccgtgcagggcgaccccgacaccaccgagctgcacttcgccctgggcaacctg
ttccgccgccggggcgactacgaccgcgccgtgcgcgtgcacgaacacctgctttcgcgg
gccgacctcaaccgcaaggagcgcgaccgcgcacagcacgcgctggcgctcgatttcctc
aaggccggcctgctcgaccgcgccgagtctgcgctgagcaaactcgaaggcacggccttc
gagaacgaggcgcgcctggccctgctgggcatctacgaacgctcgcgcgactgggcgcaa
gcccgcgccatcgccgaaaagctcgactcggcggaacacggcgccttcaccacgcgcgtg
gcccactacctgtgcgaactggccgagctcgcgcaccgcgagggccaggccgagcgcgtg
cgtgccctgctcgacgaggccgtgcggcgcgcacccacgctggcgcgcggctggatggcg
cgctcggccctgcgcaaccagcagggcgacgcggcaggcgccctggacgacctgctggcc
ctggccgaacaggcgcccgccgccctgccgctggccgcgcgcgccatggccgagctggcc
cagcagaccggccgcaccgatcccgtgctgcgcaccctgggcaacgcccaggcgcgcgcg
ccctccatcgacgtgaccgaagccctggcccgcctggcgccccagcccgagggcgcgcgc
ggcatgtacttgcgccacctggaagccgagccctcgctcgtgatcgccagccagtggctg
gcgggcgaaaccctgtccaacccgcaggcccagtccagcgtgcagcgcgcgctggagcac
gccagcggcccgctgcggcgctaccgctgcgcggcctgcggtttcgaggcgcgccagcac
ttctggcagtgcccgggctgccaggcctgggacagctacccggcccgccgcgtggaagag
ctctag
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