Hydrogenophaga sp. SNF1: SOM08_08225
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Entry
SOM08_08225 CDS
T10669
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SOM08_08225 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hydr03011
]
SOM08_08225 (rpsA)
Ribosome [BR:
hydr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SOM08_08225 (rpsA)
Bacteria
SOM08_08225 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SpuA_C
Motif
Other DBs
NCBI-ProteinID:
WQB85299
LinkDB
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Position
complement(1696906..1698591)
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AA seq
561 aa
AA seq
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MSESFAALFEESLKRAEMRAGEVITAEVVRIEHNHVVVNAGLKSEAYVPLSEFKNDQGEL
EVQVGDFVSVAIDSVENGFGDTLLSRDKAKRLASWMALEKALESGEFVTGTTTSKVKGGL
KVMVNGISAFLPGSLVDSRPTKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAIVHGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKQRVSLGLKQMGDDPWLGVSRRYPQGTRMFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNVAPSKLVSLGDEVEVMVLDIDEDKRRISLGMKQCRANPWHEFAEQ
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEAGEQAVRNYKKGQEVEAVVL
AIDVERERISLGIKQLDGDPFTTFVSVNDKGSVVTGKVKTVDAKGAEIDLGEDVLGYLRA
SEISRDRVEDARNVLKEGDEVSAVVVNVDRKTRNIQLSIKAKDNADAQEAMASLSQSAGN
AGTTSLGALLRAKLDNNSNGR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgccctctttgaagagtccctcaagcgcgccgaaatgcgcgcg
ggcgaagtcatcaccgccgaggtcgttcgcatcgaacacaaccacgtggtggtcaatgcc
ggtctgaagtcggaagcctacgttccgctgtccgaattcaagaacgaccaaggcgaactc
gaagtgcaggtcggcgacttcgtgtccgtggccatcgactccgtcgaaaacggcttcggc
gacacgctgctgtcgcgcgacaaggccaagcgcctggcctcgtggatggccctggaaaag
gccctggagtcgggcgaattcgtcaccggcaccaccaccagcaaggtcaagggcggcctc
aaggtcatggtcaacggcatcagcgccttcctgccgggctcgctggtcgacagccgtccc
accaaggacctcacgccctacgagaacaagaccctggaattcaaggtcatcaagctcgac
cgcaagcgcaacaacgtggtgctgagccgccgcgccgtggtggaagcctccatgggcgaa
gagcgcgccaagctgatggaaaccctgaaggaaggcgccatcgtgcacggcgtggtcaag
aacatcaccgagtacggtgcgttcgtggacctcggcggcatcgacggcctgctgcacatc
accgacatggcctggcgccgcgtgcgccaccccagcgaggtggtgcaggccggccaggaa
atcacggccaagatcctcaagttcgacaccgagaagcagcgcgtctcgctgggcctcaag
cagatgggcgacgacccgtggctgggcgtgagccgccgctacccgcagggcacccgcatg
ttcggcaaggtcacgaacatcgccgactacggcgcgttcgtggaactcgagcccggcatc
gaaggcctggtgcacgtctccgaaatggactggaccaacaagaacgtggccccgtccaag
ctggtgtcgctgggcgacgaggtcgaggtcatggtgctcgacatcgacgaagacaagcgc
cgcatctccctgggcatgaagcagtgccgcgccaacccctggcacgagttcgccgagcag
accaagcgcggtgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtcggcctggccgccggcatcgacggcctggtgcacctgtccgacctgtcctggaacgaa
gccggcgaacaagccgtacgcaactacaagaagggccaggaagtcgaggccgtggtgctc
gccatcgacgtcgagcgcgagcgcatcagcctgggcatcaagcagctcgacggcgacccg
ttcaccaccttcgtgtcggtgaacgacaagggctccgtcgtgaccggcaaggtcaagacc
gtggacgccaagggcgccgaaatcgacctcggcgaagacgtgctcggctacctgcgcgcc
tcggaaatcagccgcgaccgcgtggaagatgcccgcaacgtgctcaaggaaggcgacgaa
gtgtcggccgtggtcgtcaacgtcgaccgcaagacgcgcaacatccagctgtcgatcaaa
gccaaggacaacgccgacgcgcaggaagccatggccagcctgagccagagcgcaggcaat
gccggcaccaccagcctgggcgccctgctgcgcgccaagctggacaacaacagcaacggc
cgctga
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