KEGG   Hydrogenophaga sp. SNF1: SOM08_08805
Entry
SOM08_08805       CDS       T10669                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
hydr  Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:hydr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hydr02044]
    SOM08_08805 (traD)
Secretion system [BR:hydr02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SOM08_08805 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 Cpta_toxin
Other DBs
NCBI-ProteinID: WQB85409
LinkDB
Position
1818824..1820983
AA seq 719 aa
MAHSQAVEVLLRPAVELYTVAVCAGAALLCLVAPWSLALSPLLGLGSALAFLTFGAIRFR
DAWAILRYRRNIRRLPRYVMTSRDVPVSQQRLFVGRGFRWDQRHTHRLMQTYRPEFRRYV
EPTAIYRAARHVEERLEFAPYPLSKLAKALAWDSPLNPARPLPPVGGLPRLHGIEPHEVD
VTLPLAERVGHSLVLGTTRVGKTRLAELFITQDIRRKVGGQHEVVIVFDPKGDADLLKRM
YVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA
WRFVNIIARALVELGQRPDYLLIQRHVINIDALFIEYAQHYFARSEPKAWEVIVQLEAKL
NEKNIPRNMIGREKRVVALEQYLSQVRIYDPVLDGLRSAVRYDRTYFDKIVASLLPLLEK
LTTGKIAQLLAPNYSDLGDPRPIFDWMQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKFGIDDGLPGASAGVKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYT
QTMSDIEARIGNRAKAGQVIGNFNNLFMLRVRETITAELLTRQLPKVEVYTTTVMSGATD
SSDPTGNTAFTSNTQDRISSNSVPLIEPAHVVGLPKGQCFALIEGGHLWKVRMPLPAPDP
DEAMPKDLQELAGYMRQHYVEAGDWWDSKGLPGLQDQALPDDLLADFKQMASVDEGAAA
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcccactcccaagccgtcgaagtcttgctgcggccagcggtggagctttacaccgtc
gcggtctgtgcgggcgccgcgcttctgtgcctggtggccccgtggtcgctcgcgctgagc
cccttgctcggcctgggcagcgcgctggccttcctgaccttcggtgcgatccgcttccgg
gacgcctgggcgatcctgcgctaccggcgcaacatccggcgcctgccgcgctacgtgatg
accagccgcgacgtgccggtcagccagcagcggctgttcgtcggccggggtttccgctgg
gaccagcgccacacgcaccggctgatgcagacctaccggccggagttccgccgctatgtc
gaaccgacggcgatctatcgggcggcacggcacgtcgaggagcgcctggagttcgcgccg
taccccctgtccaagctggcgaaggccctggcctgggacagcccgctcaacccggcgcgg
ccgctaccgccggtcggtggtctgccgcgcctgcacggcatcgaaccgcacgaggttgac
gtcaccctgcctttggccgagcgcgtcggccattcgctggtgctcggcaccacccgcgtc
ggcaagacccgcctggccgaactgttcatcacccaggacatccgccgcaaggtgggcggc
cagcacgaggtcgtgatcgtcttcgaccccaagggcgacgccgatctgctcaagcgcatg
tacgtggaagccaaacgcgccggacgcgaaggcgagttctacgtcttccatttgggctgg
ccggacatcagcgcccgctacaacgccgtggggcggttcgggcgcatcagcgaagtcgct
acgcgcatcgcgggccagctctccggtgaaggcaattcggccgccttcagggagttcgcg
tggaggtttgtcaacatcatcgctcgtgctctggtcgagctggggcagcggcccgactac
ctgctgatccagcgccacgtcatcaacatcgatgcgctgttcatcgagtacgcccagcac
tacttcgccaggagcgagccgaaagcctgggaggtcatcgtccagctcgaagccaagctg
aacgagaagaacatcccgcgcaacatgatcgggcgggagaagcgcgtcgtcgcgctggag
cagtacctctcgcaggtgcgcatctacgacccggtgctcgacgggctgcgcagcgcggtg
cgctacgacaggacgtacttcgacaagatcgtggcgtcgctcctgccgctgctggagaag
ctgaccaccggcaagatcgcgcagttgctcgcgccgaactactcggacctgggcgacccg
cggccgatcttcgactggatgcagatcatccggaagcgggccgtggtctatgtcgggctg
gatgcgttgtcggacgctgaggtcgcggccgcagtgggaaattccatgttcagcgatctg
gtgtcggtcgccgggcacatctacaagttcggtatcgacgatggcctgccgggcgcgtcg
gcaggcgtgaaggtgccgatcaacgtgcacgccgacgagttcaacgagctgatgggcgac
gagttcattccgatggtcaacaaaggcggcggcgccggggtgcaggtcacggcctatacg
cagaccatgagcgacatcgaggcccgcatcggcaaccgcgccaaggccggccaggtcatc
gggaacttcaataacctgttcatgctgcgcgtgcgcgagaccatcacggccgagctgctg
acgcggcaactgcccaaggtcgaggtctacacgacaacggtgatgagcggtgccaccgac
agttccgacccgaccggcaacaccgcgttcacgtccaacacgcaggaccgcatcagcagc
aacagcgttccgctgatcgaaccggcacacgtcgtcggcttgcccaaggggcagtgtttt
gcgctgatcgagggcggccacctgtggaaggtgcgcatgcccttgccggcgcccgatccc
gacgaggccatgcccaaggatttgcaggagctggccggctacatgcgccagcactacgtc
gaggccggcgactggtgggacagcaaggggcttcccggcctgcaggatcaggcgctgccc
gacgatctgctggcggacttcaagcagatggcgagcgtggatgaaggggccgcggcatga

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