Hydrogenophaga sp. SNF1: SOM08_09135
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Entry
SOM08_09135 CDS
T10669
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hydr02044
]
SOM08_09135
02035 Bacterial motility proteins [BR:
hydr02035
]
SOM08_09135
Secretion system [BR:
hydr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SOM08_09135
Bacterial motility proteins [BR:
hydr02035
]
Pilus system
Pilus assembly proteins
SOM08_09135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_3
Motif
Other DBs
NCBI-ProteinID:
WQB85472
LinkDB
All DBs
Position
complement(1882314..1885259)
Genome browser
AA seq
981 aa
AA seq
DB search
MSRSPCSRPLPHPAPGPAPIARPPRAPRAAAHLPGWLLCAIGTAAGLGTVGAQAQPSQRP
LLVSSTGAKPNIVVSLDNSGSMAIPYPDGYDVSRPGWRGLPAGDDGQPMFEAQRSPDVNP
MYYNPRITYRPRVDAKGDPLQANDGIQFISNARSAQFSYKVFADPAAPAGGGPVLIFSAQ
FPHYPAVQEPKDQAPLYSLSLSQWAPVNQAHGAADPKGNTPPFTYVLCDPSAPNGLLRTT
ASGTTCNKVLRTVDIRYDDTDAIVLPADHRRTECKQASNLRCSHQEEVTNIINWYRYYRT
RIEAIKTALGQALQSDKLTDGLARVGYRPINMAPVSGALPHLGKDTNTPQVLRGVRPWAK
GSANDQFYQWLYGSYANGGTPLQRAYKDVANYLGVGAGAKENPWARDPSRVSDDTNPELG
CRRAYQVVLSDGGWSDDDLRGTPPDTPNQDATQGPSFARSTAGDAPAETFAYQPEGINSG
RQRYIPYPGSATGGLADLAAQYHWHTDLRPQLENNVPTRDFQPAFWQNLTTYAIGYLIRP
SGDSGVASGLSFQQINTYRNQYLVKGYQGATPPHWPAKGADLRTTAWNNNDKFWAFARPE
SDRIDDFIQSGYTGGGRSFSVQDAAGVRATIDAILSDILDASGNDAGIALGSAPAAANPL
GGRLKFKVDYRTTDNMGNVTAQRIDQNGKPQPLDQDANGQALNPPSETYWSAQQLTPAPA
DRRLYSLGDDGLGIELKGRLDRLPNGIRSALRTGDQAANLPDDERFVDYLRGKDPVVDLK
NQPYRLRASPLGAIVNSAPVLLGASQHHGYEDAQSTVSGKERYAAYRDRIALPPDTLFVA
TNAGVVHALDAANGREIAAYMPRRSLRRLLDQAQPDSGFRYVLDGPLSTHDVYDGRSWNA
LVVGSGGRGERVVYALRPRLDAQGQAQMDQGGWRRAAAPPSKRSATTRGSTRSPGCPPRA
ACATARPWSSTRSRAAADSRA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctcgccctgctcccgacccctgccccatcccgcgcctggcccggcgcccatc
gcccgtccgccacgcgccccacgcgcggcagcgcatctgccgggctggctgctgtgcgcc
atcggcaccgccgccgggctgggtacggtgggtgcccaggcccagcccagccagcgcccg
ctgctggtcagcagcacgggcgccaaacccaacatcgtggtctcgctggacaactcgggg
tcgatggcgatcccctatcccgatgggtacgacgtcagcaggccagggtggcgcggcctg
cccgccggagacgacggtcagccgatgttcgaggcgcagcgctcacccgacgtcaacccc
atgtactacaaccctcggatcacctatcggccacgggtggatgccaagggtgacccgctg
caggccaacgacggcatccagttcatctccaacgcccgctccgcgcagttctcgtacaaa
gtcttcgccgatccggcggcccccgccgggggcggcccggttctgatcttcagcgcccag
ttcccccactacccggcggtgcaggagcccaaggaccaggcgccgctctactccctgagc
ctgagtcaatgggccccggtgaatcaggcccatggcgccgccgatcccaagggcaatacg
ccgccgttcacctacgtcctctgcgacccctccgcgcccaatggcctgctgaggacgacg
gcatccggcacgacctgcaacaaggtactgcgcaccgtcgacatccgctacgacgacacg
gacgcgatcgtcttgccggccgaccaccggcgcaccgaatgcaaacaggcctccaacctg
cgctgcagccaccaagaggaagtcaccaacatcatcaactggtaccgctactaccgcacg
cggatcgaggcgatcaaaaccgccctgggccaggccctgcagagcgacaagctcaccgac
ggcctcgcgcgcgtcggctaccgccccatcaacatggctcccgtgtccggcgcattgccg
cacctgggcaaggacaccaacacgccccaggtgctgcggggcgtgcgcccctgggcgaag
ggctcggccaacgatcagttctaccagtggctctatggcagctacgccaacggcggcacc
cccttgcaacgggcctacaaggacgtggccaactaccttggtgtgggcgccggggccaag
gaaaacccttgggcccgagacccgagccgcgtgagcgacgacaccaaccccgagctgggt
tgccggcgcgcctaccaggtggtgctgtccgacggcggctggagcgacgacgacctgcga
ggcacgccgcccgacacccccaaccaggacgccacccaaggcccgagcttcgcgcgcagc
accgccggcgacgcccccgccgagacctttgcctaccagcccgagggcatcaacagcggc
cggcaacggtacatcccctaccccggctccgccacgggcgggctggccgatctcgccgcc
cagtaccactggcataccgacctgcggcctcaactggagaacaacgtgcccacccgcgac
ttccagcccgcgttctggcagaacctcaccacctacgccatcggctacctgatccgcccc
tcgggagacagcggcgtcgcatcgggcctgagctttcagcagatcaacacctaccgcaac
cagtacctggtgaaggggtaccagggcgccacgcctccccattggcccgccaagggcgcc
gatctgcgcaccaccgcgtggaacaacaacgacaaattctgggcattcgcccgcccggaa
tccgaccgcatcgacgacttcatccaatcgggctacaccggtggcggccgcagtttcagc
gtgcaggacgccgctggcgtgcgcgccaccatcgacgccatcctctcggacatcctcgac
gccagcggcaacgacgcgggcatcgcgctgggaagcgccccggccgcggccaatccgctc
ggcggccgcctgaagttcaaggtggactaccgcaccaccgacaacatgggcaacgtcacg
gcccagcggatcgatcagaacggcaagccccagccgctcgaccaggacgccaacggccag
gcactcaatccccccagcgagacctactggtcggcccagcaactgacgcccgctcccgcc
gaccgccggctctacagcctcggcgacgacgggctgggcatcgagctgaagggtcgcctc
gaccgactgccgaacggcatccgcagcgccctgcgcacgggcgaccaggccgccaacctg
cccgacgacgagcgcttcgtcgactacctgcgcggcaaggatccggtcgtcgacctcaag
aaccagccgtaccgcctgcgcgcctcgcccctcggcgccatcgtcaacagcgcgccggtg
ctgctcggcgcgtcgcagcaccatggctatgaagacgcccagagcaccgtgagcggcaag
gagcgctacgcggcctaccgcgaccgcatcgccctgccccccgacaccctgttcgtggcc
accaacgccggcgtggtgcacgccctcgacgccgccaacggccgggagatcgcggcctac
atgccccggcgcagcctgcgccgcctgctcgaccaggcccagcccgacagcggcttccgc
tacgtactggacggcccactcagcacacacgatgtgtacgacggccgttcatggaacgcg
ctggtggtgggcagcggcggccggggcgagcgcgtggtctatgccctgcggccccggctc
gacgcgcagggccaggcccagatggaccagggcggctggcggcgcgccgcagcgccaccg
tcgaagagatcagcaacaacgcgcgggtccaccaggtcgcctggctgtccgccgagagcg
gcctgcgctactgcgaggccgtggtcatcgactcggtcgagggcggcggccgattcgagg
gcgtga
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