Hydrogenophaga sp. SNF1: SOM08_09150
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Entry
SOM08_09150 CDS
T10669
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
hydr Hydrogenophaga sp. SNF1
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hydr02044
]
SOM08_09150
02035 Bacterial motility proteins [BR:
hydr02035
]
SOM08_09150
Secretion system [BR:
hydr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SOM08_09150
Bacterial motility proteins [BR:
hydr02035
]
Pilus system
Pilus assembly proteins
SOM08_09150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
WQB85475
LinkDB
All DBs
Position
complement(1887006..1890749)
Genome browser
AA seq
1247 aa
AA seq
DB search
MKTSCELRLAAGLLASAFAVTALAFEPVQQPPATSAVPGNVMLALSVEFPTGLQVSYTST
TYSSPTKYEGYFDNRKCYTYDSTAEVFNPTSAITSTGGCGSSEWSGNLLNWLTMTNLDQF
RSVMTGGTRDNFSAKALSNNNYYGDTTSRTILIRSFSDRNSYNPNKTLPSGSSAPLPSTF
RGKTVRSGGYGSKFIVSDSGFSDMTDTQQRQSCSQHTDLNRLGCFNIRVSACVMSPAQGV
TGNTREANCQAKYSGVAKPEGLIQEYAATLRFAAFGYLNQTGNDRNGGVLRSAMKSVGPV
AATSTGVTTNANVEWNTTTGVILVNPDPTDATASGVSNSGLMNYLNKFGYAAGYKGNDPV
SELYYAALRYMRGYALPTSYTDNLTNAYKDGFPVITGSAHERGGNRDPMINTCQKNFILG
IGDIYTHQDGQLPGRTGGPSDPNGLNVDTLWSHLTDQEGSTSWTGGASGGTPYIAGLAHW
ANTNDIREESAMPGKQTVRTYWVDVLENGNGVGGMPAAGTLKTQYWLAAKYGGFDSTLTP
ADNPNVKLDPASPVSWDKDGDGVPDTWFAGSTPTLLKSGLAAAFSNINAEAGAGAASSAA
VTSSRQTDTSEIIYAGYDPKTWTGNVRSCSPTQTATQCANNPRWDASNWLNSATNPVAAA
DKLTPSTRKIFTSTRSGGTFASMPFLWDSLNSTQQNTLNSDANGANRVAFLRGARTHEGT
LFRVRPTNLLGDVVNAGVTYLAGPGPALTGANFPGHTAYRNTNKTRPAVVYVGANDGMLH
AFSGVNGKELFGYIPGSVFNKLNGLSAFSFRHEYLVDGTPMVGDFERTGSTATAPSWGTI
LVGGLGAGGRGYYALDITNQSNFATSTEAALASSVPMWEFTSADDVDLGFTFNEPSIHPG
NGTYRQISKVADATEATGVWRVIVGNGYGSIDASNNPIGKAILFMLNANTGAVATKLQAY
APTAASPAQNGLSAPTPVDTDRDGLIDTVYAGDYLGNMHKFQFSKASGGDFVLAKSGEAD
GAWRYLGKVYASGEPITTAPSVIPACSGIGWNVLFGTGKLNEAGDYTDNSARGFYNVLDR
SPSSSLTVPATDLATISSFTEPVLGDGFVGRNWSTPNLTGKRGWKISFSGGERVLTNSTL
PPDTGAVLFGTTQPTGDICTPGNSGYLMAVNICSGATGDLIFNGVAVGGVAVDSSGVIKV
SNTYTSQQNKQVVVCNQEHCKEVGGGGQFAPSIAPRGRYSWRELLSK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcatgtgaactccgactggcggcaggcctgctggcctccgccttcgcggtg
acggcgttggcattcgagcctgttcagcaaccccccgccaccagcgccgtgccaggcaac
gtcatgttggcgctgtccgtcgaatttccgacaggcctccaggtctcctacacaagtacg
acgtacagcagcccgaccaaatacgagggctacttcgacaatcgcaaatgctatacctac
gacagcaccgctgaagtattcaatcccaccagcgccatcacctcgaccggagggtgtggc
agctccgaatggagcggaaacctgctgaattggctcaccatgaccaacttggatcagttt
cgctcggtgatgacaggaggcacgcgcgacaatttctccgcaaaggccctgagcaacaac
aactactacggcgacaccacgagccgcaccatcctgatccgatcatttagtgaccggaac
agctacaacccaaacaaaacactccccagcggctccagcgcgccactccctagcactttc
cggggcaagaccgtgcgctctgggggctatggctcaaaattcattgtgtctgacagcggt
ttttccgatatgacagacacacaacaaaggcagagctgtagccaacacaccgacttgaac
cgactcggatgtttcaacatccgagtgtcggcctgcgttatgtcgccggctcagggggtc
acaggaaatacccgagaagccaactgccaagccaagtactcgggagtggccaagcccgaa
ggattgattcaagagtacgcggcgaccctgcgattcgcagctttcggctacctcaaccaa
acgggaaatgaccgcaacggcggcgtgctgcgttcggccatgaaaagcgtagggccggtc
gcggccaccagcacaggcgtcaccaccaatgcaaacgtcgaatggaacacgaccactggc
gtcatcttggtcaacccggatcccaccgatgccacagcgagcggcgtcagcaattcgggc
ctaatgaactacctcaacaagttcggttatgccgcaggctacaaaggcaatgaccccgtc
agcgagctgtactacgcggccctgcgctacatgcgcggctacgcactgcccaccagctac
acagacaacctcaccaacgcctataaagacgggttccctgtgatcactggcagcgcccat
gagcggggcggcaaccgggatccgatgatcaacacctgccagaagaacttcatcctggga
attggggacatttacacccaccaagatggccagctgcctggcagaaccggcggaccctcc
gaccccaacggcttgaacgtcgacaccctgtggagccaccttaccgaccaagaaggcagc
acgtcatggacaggtggcgccagcggcggcacaccctacatcgcaggactcgcacattgg
gcaaacaccaatgacatccgcgaggaatccgccatgcctggcaaacaaacggttcggacg
tactgggtcgacgtgctggaaaacgggaacggcgttggtggcatgcccgccgccggcacg
ctgaagacccagtactggctcgcagccaagtacggcggatttgacagcacactgaccccc
gcagacaacccgaatgtgaaactggaccccgccagtccggtgtcgtgggacaaagacggc
gatggcgtccccgacacttggtttgcgggaagcacgccaaccttgttgaagtcaggcctc
gctgcggccttcagcaacatcaatgccgaagccggtgccggcgcggcttccagtgcggcg
gtaacgtctagccgccagacagacaccagtgaaatcatttacgcgggatatgaccccaaa
acctggacgggaaatgttcgttcctgttcaccgactcagaccgccacgcaatgcgccaat
aatcctcgatgggatgcatccaattggctcaacagcgccaccaatcctgtcgcggccgca
gacaagctaacccccagcactcgaaaaatcttcacgtccacgcgcagcggcggcacattt
gcatcgatgccatttctgtgggacagcttgaacagcacgcaacaaaataccctgaatagc
gacgccaacggcgccaaccgcgtcgcctttttgcgtggcgctcgcacccatgagggcaca
ctctttcgggtccgccccaccaaccttctgggggatgtcgtcaatgcaggcgttacctat
ctggccggccctggccccgcattgacgggcgccaattttcctggccataccgcctacaga
aacaccaataaaacccgaccagccgtggtatatgttggggccaacgatggcatgctgcac
gcgttctccggagtcaatggcaaggaattatttggctatatccccggaagcgtatttaac
aagctgaatggcctatcggcatttagcttccgtcatgagtatttggtagatggcacgccc
atggtgggcgactttgagagaaccggctcaaccgctacggccccaagctggggcacgata
ttggttggaggcctgggtgctggcgggcgtggttattatgcgctcgacattaccaatcaa
agcaatttcgcaacttccactgaagccgcattggcctccagcgttcccatgtgggaattt
acctccgccgacgatgtggacctcggtttcacgttcaatgaaccgtcaatccatccaggc
aatggtacctatcgccagatctcgaaagtggccgatgcgacagaggcaactggcgtttgg
cgggtcattgtggggaatggctatggctcgattgacgcaagcaacaaccccatcggcaaa
gccattctattcatgctgaacgcgaacaccggggccgtcgccaccaaactccaggcctat
gcacccacagcagcaagtccggctcaaaacgggctgtccgctcccacgccggtagatacc
gatcgcgacggtctgatcgacacagtctacgctggtgactatctcggcaatatgcataag
tttcagttttccaaagcatcgggcggcgatttcgtattggccaaatcaggggaagccgac
ggtgcttggcgctacctgggcaaagtgtatgcctctggagagcccatcaccacagcgcca
tctgtaatacccgcatgctcaggcattggctggaacgtgctttttggcactgggaaactc
aacgaagcgggtgactataccgacaactccgcccgcggtttctacaacgtgctggaccgc
tcgccgtcctcttcgctcacggttcctgccaccgatctcgccacgatttccagctttacc
gagccggtccttggcgatggattcgtcggtcgaaattggagcacaccgaacctgacaggc
aaacgtggctggaaaatttcattctccggtggcgagcgggttctgaccaattccacgcta
cctcctgataccggcgcagtgttgttcggcaccacccagcctacgggtgacatttgcacc
cccggaaattccggatacctgatggcggtcaacatctgttctggcgcaaccggcgatctg
atctttaatggcgtcgcagtaggtggcgttgcggtcgactcatctggcgtcatcaaagtc
agcaacacctacaccagccaacaaaacaagcaagtggtggtatgcaatcaagagcactgc
aaggaagtcggtggcggcgggcaattcgcacccagcattgccccacgcggccgctactct
tggcgggaacttctctcgaagtaa
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