Hydrogenophaga sp. SNF1: SOM08_09225
Help
Entry
SOM08_09225 CDS
T10669
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOM08_09225 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hydr01007
]
SOM08_09225 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hydr03016
]
SOM08_09225 (cysS)
Enzymes [BR:
hydr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SOM08_09225 (cysS)
Amino acid related enzymes [BR:
hydr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SOM08_09225 (cysS)
Transfer RNA biogenesis [BR:
hydr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOM08_09225 (cysS)
Prokaryotic type
SOM08_09225 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
WQB85490
LinkDB
All DBs
Position
1907405..1908853
Genome browser
AA seq
482 aa
AA seq
DB search
MTLHIHNTLTRRLEPFAPIEPGHVRMYVCGITVYDLCHVGHARSNIAFDVARRWLEASGY
RVTFVRNITDIDDKIIRRAVQNGETVRGLTDRMIEAMYQDFDALGIARPTHDPRATDYVP
QMLDIVRALEDKQLAYRAADGDVNYAVRRFPGYGKLSGKTLDELQAGERVAVAQGKGDPL
DFVLWKAAKPDEPADAQWDSPYGRGRPGWHIECSAMACALLGKTFDIHGGGADLQFPHHE
NEIAQSEGANGVPLAAVWMHNGFVNVDNEKMSKSLGNFFTIREVLQKYDAETVRFFMLRA
HYRSPLNHSDAHLDDARAALKRLYTALSVVKAADVSIDWREPFAARFKAAMDDDFNTPVA
LSVLFELASEVNRGKDPRHAGLLRALGGVLGLLQADPMAWLQGGPSRHHEASGALVGQGA
CVSGNAHVTSGLDEPAIAARIAARAAAKQAKNFAEADRIRNELLGQGIVLKDSAAGTTWE
RA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcatatccacaacaccctcacgcgccggctcgagcctttcgcgcccatcgag
cccggccacgtgcgcatgtacgtttgcggcatcacggtctacgacctgtgccatgtgggc
cacgcccgctccaacatcgccttcgacgtcgcgcgccgctggctcgaggccagtggctac
cgcgtcaccttcgtgcgcaacatcaccgacatcgacgacaagatcatccgccgcgcggtg
cagaacggtgaaacggtgcgcggcctcaccgaccgcatgatcgaggccatgtaccaggac
ttcgacgccctgggcatcgcacgccccacgcacgacccgcgcgccaccgactacgtgccg
cagatgctcgacatcgtgcgcgcgctcgaagacaagcaactggcctaccgcgcggccgac
ggcgacgtgaactacgcggtgcgccgcttccccggctacggcaagctctccggcaagacg
ctcgacgaactccaggcgggcgagcgcgtggccgtggcccagggcaagggcgacccgctg
gacttcgttctgtggaaggccgccaagcccgacgaacccgccgacgcgcagtgggactcg
ccctatggccgcggccgtccgggctggcacatcgagtgctcggccatggcctgcgcgctg
ctcggcaagaccttcgacatccatggcggcggcgccgacctgcagttcccgcaccacgag
aacgagatcgcgcagagcgagggcgccaacggcgtgccgctggccgcggtgtggatgcac
aacggcttcgtcaacgtcgacaacgagaagatgtccaagagcctgggcaacttcttcacc
atccgcgaggtgctgcagaagtacgacgccgagacggtgcgcttcttcatgctgcgggcc
cactaccgcagcccgctcaaccacagcgacgcccacctggacgacgcgcgcgccgcgctc
aagcgcctgtacaccgcgctgtcggtggtgaaagcggcggacgtttccatcgactggcgc
gagcccttcgccgcgcgcttcaaggccgcgatggacgacgacttcaacacgccggtggcc
ttgagcgtgctgttcgagctcgcgagcgaggtcaaccgcggcaaggacccgcgccacgcg
ggcctgctgcgcgcgctgggcggcgtgctggggttgttgcaggccgatccgatggcatgg
ttgcagggcggaccatctaggcatcatgaagcgtctggtgcccttgttgggcagggcgcc
tgcgtctctggcaatgcccatgtgacatcgggcttggacgagcccgccatcgccgcgcgc
atcgccgcgcgcgccgcagccaagcaagcaaagaacttcgccgaagccgaccgcatccgc
aacgagctgctcggccagggcatcgtgctgaaagacagcgccgcaggcaccacctgggag
cgcgcctga
DBGET
integrated database retrieval system
